Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00238 ATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAAGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAACTCATGATTCTCAGTATGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCTAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAATAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGACCTAGAAACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACGTATTATATCTGCTGGTGAAAAACCTGTGGCAGATAAGGAGAACCTAAATAATGGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACATTGCTATAGCTGAAGATCATAAATATTCAGTCCATGATGGACTGCATGCGAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGGCAAATCGAAGGCTAGTTATTGAAGAAAAAAAACTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCCGTGCGGAACCACCTTGGTGGGGATGATGTAGACCTTGCACGTTCTCTTTCGACTGGCCCTCGGTGTCAAAATCCAAGGAATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGAAACTGTTAATCATGTTGACAGAACAAAGGATAGTTCTAGTGATCATGTCAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACCCAAGAATTTGTTGCCGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTCAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAAGTAATGAGTTTCCTACATCAAGCACTGGTTTCAAACGTGAAGTCATTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAGTAGCATATATGCTGAAGAAATGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCTCTAAATGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATATTTGCTCTCAGCTGAAAAAGTTGGATTTTGTTGGTCTTACTTCTGGAGAGCCTGTAGTGAGAGACTTGGCCAATAATGGCATGGTGCTCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCTGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAGGAAATTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGACTCACAGCGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAGATTCCACAAAAAGTAAATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGTGTCAATGAAGAGTCCATTGACCAAGGTAACAATATGGCATGTAGGAATTTTGATAGTAAAGGAACTGTGTTTGGCCAGACATATTTGGAGTTGCAAGTAAAGTTAGAGAGACCAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGACCACCAGTTCTCAATTGTGTCAAGAAATGAATTCTACTGGTTCATCCCTGGGAGATAGTGCACCAGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAATGGAAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCGAGAGCCCTCTTTGTCTTCGGAGATCCCTTCTGTCGAATTCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAATTTTGGAGAGAACAGTATATGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCAGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGATACACTTGTGGAGGCTTCTGCAGTTAGTTCTCAGAAACGTCCTTTGAATGTGGTAAATGGCAAATTGGAAGACACAGAAAGTAGCAAGAAGCTGCAAAAAAGTTTGGGTGGAGTTTTTGAATGCAACGAATCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCCTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGCAATAAAGTTGACTCGGGGATGGTGGTGAACAGGGAGTCACTGAATGGGGCTGGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACAAAACCGTCACACAAGGGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTACAAAAAATGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 3744 0.4153 MIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSTHDSQYENVENGQALSGKYQDSKCLESLDDITSCISRTSNANLASGSQQINTDRINVSCSSTLVSHLEAEGPRNGPSVDMSGLSEGCMENVDSSFTKERVRIISAGEKPVADKENLNNGTAKVSVEICPKSEADMGNNVDIAIAEDHKYSVHDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETANRRLVIEEKKLHKVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHLGGDDVDLARSLSTGPRCQNPRNKTSTSVNETQQDRLPRSQETVNHVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTQEFVAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDESNEFPTSSTGFKREVISQNQVLVSSTLKSSIYAEEMNVKQEIVESSSFETSKCPSANDPKQLKFCQTDICSQLKKLDFVGLTSGEPVVRDLANNGMVLSSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVRKFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIRNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSDSTKSKCIPSLNVMPNEKDFPSAVMTLSETWCSPKRVNEESIDQGNNMACRNFDSKGTVFGQTYLELQVKLERPDSSVNTKSTSGILTTSSQLCQEMNSTGSSLGDSAPEHRQCIQSKPPEVMETSVSRRIVETKTNPDISGKREPSLSSEIPSVEFQIDTASNIIKDKILERTVYDENQRRPKRKQLENDLNINEEATLQGDLDLKGANCQVPNDKKIKHIDLSDTLVEASAVSSQKRPLNVVNGKLEDTESSKKLQKSLGGVFECNESAGARVSFNGSFASLVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKVDSGMVVNRESLNGAGEYVDQFEVGIPNLELALGGETKPSHKGMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHMKPVTKNEPLPTDGHNAKSSFLLFGRFTDK* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00238 1247 MobiDBLite consensus disorder prediction 348 392 - -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 453 468 - -
Phac11g00238 1247 SUPERFAMILY FYVE/PHD zinc finger 265 328 IPR011011 -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 537 559 - -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 1206 1234 - -
Phac11g00238 1247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 335 IPR013083 -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 347 474 - -
Phac11g00238 1247 SMART PHD_3 276 323 IPR001965 -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 55 93 - -
Phac11g00238 1247 PANTHER - 274 819 - -
Phac11g00238 1247 MobiDBLite consensus disorder prediction 425 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00238 Phac-Chr11 1469693 1480553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00238 273 360 C2H2 Transcription Factor Family AT3G01460 32.955 2.98e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00238 - - vun:114169861 1336.24