Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00237 ATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAAGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAACTCATGATTCTCAGTATGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCTAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAATAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGACCTAGAAACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACGTATTATATCTGCTGGTGAAAAACCTGTGGCAGATAAGGAGAACCTAAATAATGGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACATTGCTATAGCTGAAGATCATAAATATTCAGTCCATGATGGACTGCATGCGAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGGCAAATCGAAGGCTAGTTATTTCAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCCGTGCGGAACCACCTTGGTGGGGATGATGTAGACCTTGCACGTTCTCTTTCGACTGGCCCTCGGTGTCAAAATCCAAGGAGTACGTTGTTAAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATCTTGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTTAAATCCTCACACTTGGGGCGGTCAAATACTAATGAATCAAAAGTTAAATCTAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAAGCATTAAGACATACAAAAGAACTGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTCATTCAACCATGGTTAGTTCTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCTTGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTATATTCATTATCAAAGTCTATGAATAATACAGGCAGTAGAAGTCCAGAATCTCAAGTTAGTTCAGATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGAAACTGTTAATCATGTTGACAGAACAAAGGATAGTTCTAGTGATCATGTCAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACCCAAGAATTTGTTGCCGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTCAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAAGTAATGAGTTTCCTACATCAAGCACTGGTTTCAAACGTGAAGTCATTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAGTAGCATATATGCTGAAGAAATGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCTCTAAATGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATATTTGCTCTCAGCTGAAAAAGTTGGATTTTGTTGGTCTTACTTCTGGAGAGCCTGTAGTGAGAGACTTGGCCAATAATGGCATGGTGCTCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCTGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAGGAAATTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGACTCACAGCGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAGATTCCACAAAAAGTAAATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGTGTCAATGAAGAGTCCATTGACCAAGGTAACAATATGGCATGTAGGAATTTTGATAGTAAAGGAACTGTGTTTGGCCAGACATATTTGGAGTTGCAAGTAAAGTTAGAGAGACCAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGACCACCAGTTCTCAATTGTGTCAAGAAATGAATTCTACTGGTTCATCCCTGGGAGATAGTGCACCAGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAATGGAAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCGAGAGCCCTCTTTGTCTTCGGAGATCCCTTCTGTCGAATTCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAATTTTGGAGAGAACAGTATATGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCAGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGATACACTTGTGGAGGCTTCTGCAGTTAGTTCTCAGAAACGTCCTTTGAATGTGGTAAATGGCAAATTGGAAGACACAGAAAGTAGCAAGAAGCTGCAAAAAAGTTTGGGTGGAGTTTTTGAATGCAACGAATCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCCTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGCAATAAAGTTGACTCGGGGATGGTGGTGAACAGGGAGTCACTGAATGGGGCTGGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACAAAACCGTCACACAAGGGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTACAAAAAATGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 4227 0.4105 MIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSTHDSQYENVENGQALSGKYQDSKCLESLDDITSCISRTSNANLASGSQQINTDRINVSCSSTLVSHLEAEGPRNGPSVDMSGLSEGCMENVDSSFTKERVRIISAGEKPVADKENLNNGTAKVSVEICPKSEADMGNNVDIAIAEDHKYSVHDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETANRRLVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHLGGDDVDLARSLSTGPRCQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKNLETPAGMISKSMSFKSSHLGRSNTNESKVKSSFSKPGIVQDLKALRHTKELGSLDKKFQPKIDRPVIHSTMVSSVSTSKGDHKLAPLGETAKPYTVNNNREFKVNQDGKVYSLSKSMNNTGSRSPESQVSSDKTSTSVNETQQDRLPRSQETVNHVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTQEFVAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDESNEFPTSSTGFKREVISQNQVLVSSTLKSSIYAEEMNVKQEIVESSSFETSKCPSANDPKQLKFCQTDICSQLKKLDFVGLTSGEPVVRDLANNGMVLSSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVRKFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIRNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSDSTKSKCIPSLNVMPNEKDFPSAVMTLSETWCSPKRVNEESIDQGNNMACRNFDSKGTVFGQTYLELQVKLERPDSSVNTKSTSGILTTSSQLCQEMNSTGSSLGDSAPEHRQCIQSKPPEVMETSVSRRIVETKTNPDISGKREPSLSSEIPSVEFQIDTASNIIKDKILERTVYDENQRRPKRKQLENDLNINEEATLQGDLDLKGANCQVPNDKKIKHIDLSDTLVEASAVSSQKRPLNVVNGKLEDTESSKKLQKSLGGVFECNESAGARVSFNGSFASLVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKVDSGMVVNRESLNGAGEYVDQFEVGIPNLELALGGETKPSHKGMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHMKPVTKNEPLPTDGHNAKSSFLLFGRFTDK* 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00237 1408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 334 IPR013083 -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 614 629 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 344 403 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 1367 1395 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 560 613 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 344 383 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 699 720 - -
Phac11g00237 1408 PANTHER - 274 980 - -
Phac11g00237 1408 SMART PHD_3 276 323 IPR001965 -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 560 635 - -
Phac11g00237 1408 MobiDBLite consensus disorder prediction 55 93 - -
Phac11g00237 1408 SUPERFAMILY FYVE/PHD zinc finger 265 328 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00237 Phac-Chr11 1469693 1480553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00237 273 333 C2H2 Transcription Factor Family AT3G01460 36.066 2.54e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00237 - - vun:114169861 2347.78