Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00231 ATGAACAACAGTGGTGGAGGAACTTTGATGGGTTTGAGCAATGGTTATTATGGGAGATCCCCATTCACAGTGTCTCAGTGGGAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGCTTGCTGGTCTTCCTGTGCCTCACAATCTCGTGCTCCCCATTCAGAAGAGCTTCTTTCACCACCCCACATTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGATCCAGAGCCAGGGAGATGCAGGAGAACTGATGGAAAAAAATGGAGGTGCTCCAAGGAAGCATACCCTGAATCCAAGTACTGTGAGCGCCACATGCACCGTGGTCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTGTGACTCAATCTTCTTCAACTGTCACATCACTTGATGGTGGCAGTGGCAGAAGTAGAACTCTAAACTTCCAAAACCTTCCTGCAAATGGCTTTAGTAATCTCCAGGGTACTGATTCTGGAACTCACCATACCAATTATAAAGTTGATTCCATTCCCTATGCCATCCCAAGTAAAGAATGCAGGTATCTTCAAGAACTTAAATCTGAGGGTGGTGAACCTATCTTCTTCTCTGAAGCTTCAGGAAGCAACAAGGTGCTCCCAATGGAGTCACATCTGGAACACACATGGCCTTTGATGTCTACCAGAGTTGTCTCTTTCACTACATCGAAATCAACACTGTTGCATAGTGATTATCCCCAACATTCGTTTTTGTCTGGTGAATATGCATCAGAAGAGCACCTGAAGGAGGAGGATCATCAATCTCTTCGACCCCTTTTCAATGAATGGCCAAAAAGCAGGGATTCATGGTCTGCACTGGAAGATGAGAGATCTAACCAAACAGCATTCTCCACAACTCAACTCTCAATATCCATTCCCATGTCTTCTGATATCTCTGCAACGATCTCTCAGTCTCCACATGATAATTAA 951 0.449 MNNSGGGTLMGLSNGYYGRSPFTVSQWEELEHQALIFKYMLAGLPVPHNLVLPIQKSFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGRNRSRKPVESQTVTQSSSTVTSLDGGSGRSRTLNFQNLPANGFSNLQGTDSGTHHTNYKVDSIPYAIPSKECRYLQELKSEGGEPIFFSEASGSNKVLPMESHLEHTWPLMSTRVVSFTTSKSTLLHSDYPQHSFLSGEYASEEHLKEEDHQSLRPLFNEWPKSRDSWSALEDERSNQTAFSTTQLSISIPMSSDISATISQSPHDN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00231 316 SMART QLQ_2 20 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac11g00231 316 Pfam WRC 76 118 IPR014977 -
Phac11g00231 316 MobiDBLite consensus disorder prediction 116 148 - -
Phac11g00231 316 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Phac11g00231 316 Pfam QLQ 21 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac11g00231 316 ProSiteProfiles QLQ domain profile. 21 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac11g00231 316 PANTHER GROWTH-REGULATING FACTOR 5 20 304 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac11g00231 316 MobiDBLite consensus disorder prediction 105 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00231 Phac-Chr11 1444673 1448945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00231 8 118 GRF Transcription Factor Family AT3G13960 57.377 2.02e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac11g00231 WRC 6.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00231 - - gmx:100787567 512.301