Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00228 ATGGCACCTTCTCGGAGTGTTACCGATTCGATTCCTCCGTCAACAACGCCGGAAGTTGAAGAGAACGATCTTCGGCCGTTCTTTGTTCTTCATAAAGCTTCATCTCGGAGAAAAGATAGAACACCAACTGCACAGGCAAAGTTGTGCAAGAGAAATGAGTTATCTTCATCGCCACAAAGTGCAAAGAAGCTGGGAGGAAGTATGACAGAGGAATGTGATCTCCATTTATTTCAGCAACTGCAGATTGAAGCCTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCCAGTGTATTTGATGATATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACTATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGGAAGCTGTTCACTGCTTTCGTTGTCACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGTCATGTGGCTAAGCTTTCGTCACTGGAGTTTTCATTGAAAAATGGGATTTCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTCTTGGACGTGCTATAGATTCAGCAGATATATCAATCTTAGCATCATGGTATAGAGAACACGTAAACTACAATAAACCACTGGTGCTGATCATTAATGATTTGGGGAGATGTTCTGGACCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGACTGTCAAGGTTCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCTGAGAAACATTCTGCCATCACATGCTCTTGAGCATTTGTGTCCCTCTAGTTTTAAGCTTGGAGCACCAGCTGAGAGAATGGATGCAGTTGTTGAGGCTGTTCTTGTGAAACATTGCACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGAAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTCTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTCTCTTACATGGACAAGCACTAGCTGAAGATCAGAAAGTGGGAAAATCTGCACTATCACCTGAGACTCTGCTGAAATACATAGACGAACTTCCGTTGTATGCAAGGAATCAAATTACTGATCATCACACTAAACAGAGCACCGCTGAGGGTTTGTCAGAATTGGTGACAAAGCAGAAGCTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTCAATCAAGATTTGTACCTGTCAAGGGGTTCTGATTGTCATGTTGGGGATGAAAGATATTGTGGTTTGTCTTCGACAAATGATTCCTGTCAACAATATTCCATCATGCAAAGCGGTGGTTTTATTAGCCAGATAGTACGCAAAGTGAGGGATCTCCCCACAGGGATGCTATATCAGTTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCATGAGAAACTGAAAGTGTTGCAGTCTTCAGTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCGAAGAGATCTGCGTCCAGGATTCCAGTAAATACTGATAAGGACGCAAGGCTAAATTCACAAGCTATCGCATTTTTAGACTGTCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAAATTTTATGTTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTGTTGGAGTTCCATAAGATTTTAAAGTGTAGCTGCTGTAGCAAGAGTGGCAATGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTCCAATCTTTTAGAACAATTGTTCTTCAAAATAAAAATAAACGGAAACAAAATTCGAAGCAATCCCCCCAACCGAAGAAGAGAAAAGCTATAAATGGATCTGCAGACCAAAACGAAGCATCAGTTCAAGCACGCTTTTGTAGGACAGTTACAGAGCTGCAGATCACTGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTTGGACTCTGA 2217 0.4096 MAPSRSVTDSIPPSTTPEVEENDLRPFFVLHKASSRRKDRTPTAQAKLCKRNELSSSPQSAKKLGGSMTEECDLHLFQQLQIEAFDIVWAKIESTIKDVLRDLNASVFDDIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGKLFTAFVVTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSLKNGISGCLKALLREFLGRAIDSADISILASWYREHVNYNKPLVLIINDLGRCSGPVLTDFILMLSEWTVKVPIIFIFGVATTVDTLRNILPSHALEHLCPSSFKLGAPAERMDAVVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLLHGQALAEDQKVGKSALSPETLLKYIDELPLYARNQITDHHTKQSTAEGLSELVTKQKLWSTAVLCLYEAGKYSRVRLLDLFCEALNQDLYLSRGSDCHVGDERYCGLSSTNDSCQQYSIMQSGGFISQIVRKVRDLPTGMLYQLIENWEKLTADISEIHEKLKVLQSSVRCEDGKSPRKSSKDNPKRSASRIPVNTDKDARLNSQAIAFLDCLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILKCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNKNKRKQNSKQSPQPKKRKAINGSADQNEASVQARFCRTVTELQITGLVRMPSKRRPDFAQRIAFGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00228 738 Pfam Origin recognition complex winged helix C-terminal 609 736 IPR040855 -
Phac11g00228 738 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g00228 738 MobiDBLite consensus disorder prediction 673 689 - -
Phac11g00228 738 MobiDBLite consensus disorder prediction 1 64 - -
Phac11g00228 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 77 362 IPR045667 -
Phac11g00228 738 MobiDBLite consensus disorder prediction 534 557 - -
Phac11g00228 738 MobiDBLite consensus disorder prediction 673 698 - -
Phac11g00228 738 CDD Orc3 587 736 - -
Phac11g00228 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Phac11g00228 738 MobiDBLite consensus disorder prediction 534 548 - -
Phac11g00228 738 MobiDBLite consensus disorder prediction 24 46 - -
Phac11g00228 738 MobiDBLite consensus disorder prediction 48 64 - -
Phac11g00228 738 CDD Orc3 83 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00228 Phac-Chr11 1411819 1420867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00228 1 670 Core DNA Replication Machinery Family AT5G16690 47.076 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00228 K02605 - gmx:100780646 1241.48