Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00227 ATGGCACCTTCTCGGAGTGTTACCGATTCGATTCCTCCGTCAACAACGCCGGAAGTTGAAGAGAACGATCTTCGGCCGTTCTTTGTTCTTCATAAAGCTTCATCTCGGAGAAAAGATAGAACACCAACTGCACAGGCAAAGTTGTGCAAGAGAAATGAGTTATCTTCATCGCCACAAAGTGCAAAGAAGCTGGGAGGAAGTATGACAGAGGAATGTGATCTCCATTTATTTCAGCAACTGCAGATTGAAGCCTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCCAGTGTATTTGATGATATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACTATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGGAAGCTGTTCACTGCTTTCGTTGTCACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGTCATGTGGCTAAGCTTTCGTCACTGGAGTTTTCATTGAAAAATGGGATTTCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTCTTGGACGTGCTATAGATTCAGCAGATATATCAATCTTAGCATCATGGTATAGAGAACACGTAAACTACAATAAACCACTGGTGCTGATCATTAATGATTTGGGGAGATGTTCTGGACCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGACTGTCAAGGTTCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCTGAGAAACATTCTGCCATCACATGCTCTTGAGCATTTGTGTCCCTCTAGTTTTAAGCTTGGAGCACCAGCTGAGAGAATGGATGCAGTTGTTGAGGCTGTTCTTGTGAAACATTGCACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGAAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTCTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTCTCTTACATGGACAAGCACTAGCTGAAGATCAGAAAGTGGGAAAATCTGCACTATCACCTGAGACTCTGCTGAAATACATAGACGAACTTCCGTTGTATGCAAGGAATCAAATTACTGATCATCACACTAAACAGAGCACCGCTGAGGGTTTGTCAGAATTGGTGACAAAGCAGAAGCTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTCAATCAAGATTTGTACCTGTCAAGGGGTTCTGATTGTCATGTTGGGGATGAAAGATATTGTGGTTTGTCTTCGACAAATGATTCCTGTCAACAATATTCCATCATGCAAAGCGGTGGTTTTATTAGCCAGATAGTACGCAAAGTGAGGGATCTCCCCACAGGGATGCTATATCAGTTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCATGAGAAACTGAAAGTGTTGCAGTCTTCAGTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCGAAGGACTTTGTGCTTTGCCAGCGGTGA 1668 0.4131 MAPSRSVTDSIPPSTTPEVEENDLRPFFVLHKASSRRKDRTPTAQAKLCKRNELSSSPQSAKKLGGSMTEECDLHLFQQLQIEAFDIVWAKIESTIKDVLRDLNASVFDDIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGKLFTAFVVTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSLKNGISGCLKALLREFLGRAIDSADISILASWYREHVNYNKPLVLIINDLGRCSGPVLTDFILMLSEWTVKVPIIFIFGVATTVDTLRNILPSHALEHLCPSSFKLGAPAERMDAVVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLLHGQALAEDQKVGKSALSPETLLKYIDELPLYARNQITDHHTKQSTAEGLSELVTKQKLWSTAVLCLYEAGKYSRVRLLDLFCEALNQDLYLSRGSDCHVGDERYCGLSSTNDSCQQYSIMQSGGFISQIVRKVRDLPTGMLYQLIENWEKLTADISEIHEKLKVLQSSVRCEDGKSPRKSSKDNPKDFVLCQR* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00227 555 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 538 IPR020795 GO:0003677|GO:0005664|GO:0006260
Phac11g00227 555 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g00227 555 MobiDBLite consensus disorder prediction 24 46 - -
Phac11g00227 555 MobiDBLite consensus disorder prediction 1 64 - -
Phac11g00227 555 MobiDBLite consensus disorder prediction 48 64 - -
Phac11g00227 555 CDD Orc3 83 362 - -
Phac11g00227 555 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 77 207 IPR045667 -
Phac11g00227 555 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 225 362 IPR045667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00227 Phac-Chr11 1411819 1420867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00227 1 548 Core DNA Replication Machinery Family AT5G16690 45.276 1.19e-154 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00227 K02605 - gmx:100780646 930.628