Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00199 ATGGCTCCATCTTCTGTCATTGTCACTTCCCGTTTTCATGAATCCATCACTCGCCATGCACTTCGCTCCTATCTCTCTGAGTTTATCTCCACTTTCTTCTATGTCTTTCTTGTCGTTGGCTCTGGAATGTCCTCACGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTCTGGTTGTGGTTGCCATTGCAAGTGCTTTTGCTTTGTCCTGTGTTTTGTATATTGCATGGGACATCTCAGGTGGACACGTGAATCCGGCAGTGACCTTTGCAATGGCAGTGGGAGGTCACGTTAGTGTACCAACTGCTATCTTTTACTGGATCGCTCAACTTATAGCCTCTGTTATGGCTTGCCTTGTTCTAAGGGTCATTGTTGTTGGCATGCATGTTCCAACCTACACCATTGCAGAAGAGATGACAGGGTTTGGAGCATCAGTGTTGGAGGGTATTCTGACATTTGTTTTGGTGTTCACAGTGTATGCAGCCAGGGACCCTAGGCGTGGTCCAATGAGTCCTAATGGCATACTTTTAGTTGGCTTTGTGGCTGGGGCAGGTGTCTTAGCCGCAGGTCCATTCTCTGGTGGGTCAATGAACCCTGCATGTGCTTTTGGCTCAGCAACCATTGCAGGGTCTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCCACCATAGCTGGTCTTCTTTATGACAATGTGCTGTTCAGTTCTTTTCCTACAGAGCTTTCAGAAGGAATTGGGGTGTGA 759 0.4769 MAPSSVIVTSRFHESITRHALRSYLSEFISTFFYVFLVVGSGMSSRKLMPDASLNPTSLVVVAIASAFALSCVLYIAWDISGGHVNPAVTFAMAVGGHVSVPTAIFYWIAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEGILTFVLVFTVYAARDPRRGPMSPNGILLVGFVAGAGVLAAGPFSGGSMNPACAFGSATIAGSFRNQAVYWVGPLIGATIAGLLYDNVLFSSFPTELSEGIGV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00199 252 Gene3D Glycerol uptake facilitator protein. 5 244 IPR023271 -
Phac11g00199 252 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Phac11g00199 252 FunFam Probable aquaporin TIP5-1 6 246 - -
Phac11g00199 252 Pfam Major intrinsic protein 18 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00199 252 SUPERFAMILY Aquaporin-like 12 244 IPR023271 -
Phac11g00199 252 PANTHER AQUAPORIN-8 12 239 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00199 Phac-Chr11 1275427 1277583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00199 1 249 Major Intrinsic Protein MIP AT3G47440 63.454 2.74e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00199 K09873 - gmx:100801448 432.18