Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00197 ATGAACTGGGATGAAGAGGGCATACGCATAATCAATCTTCTTAACGAGTGTGCAACTTTTACTGAATCAGAAAACTTCATTGGTGCAGATATTGCACTGTACCATCTCTCTCACCTTGTTTCCCCAGATGGTGATTCAATGCAACGTGTTGCTACTTATTTCACCGAGGCACTAGCATGTTGCCAAATGACAAAAAATCTGCGTGGTGTTCCAAAAGTTCTCCGTTTGGTGAGAACATTATCAACTCCTGAACAACAACTCGTGAAGAAACTGTTCTTTGATTTCTACCCCTTCTTAAAGATCGCACACACGGTCACAAATCAGACGATTATAGAAGCCATGCAAGGGGAAACAGCGATTAATGTGCTTGATCTCAGTCCATCAAACGCTGATCAGTGGACTAGTCTGATGCAGGGTTTGAGAGAGCGTCTAACGAACACACCATATCTGAAGATTACTGTCACAGCCATTCATGAGAAGAAGGAAGTGTTGGAGCAAATGGGGTTGCATCTGAAAGTTGAAGCCGAAAGATTGCACTTCCATTTCGAATTCAATGCTGTTGTGAGCAGTTTGGAGAGCCTAGACCCTGAGACATTGCCCATCAAGAAAGGTGAGCCTCTTGCAATCAGCTGTGTTCTTCAGCTTCACTCTCTTCTGGCTGCCAATGATGATGAGACGGTCAAAATGAGGGGTCAAAGGGTTTTTGCTGAGATGCTTGTGAAACAGAAGAACAAGAAGGTGAAACCAAGTCCTGACTCAGCACTCTCACCTTTTTCTCCATGTCCATCACATAAGATGGAGTGTTTTCTGAATGGTCTGTGGAGGATGCAACCCAGAGTGATGGTGGTGACAGAGCAGGAGTCAAATGTTAATGGAAGTAGTTTGAGAGAGAGGGTGTCCAAAGCTTTGAACTTTTACAGCACACTGTTTGATTGCTTGGAAGCGTCTACTTCAAGAACATGGGTAGGGAGAAGCCTGTTGGAGAAGATGCTTCTTGGTGAAGAGATCAAGAACATTGTTGCATGTGAAGGGGTTGAGAGAAAGGAGAGGCATGAGAAGCTTGAAACATGGATTCCAAGACTTGAATTGGCTGGATTTGGAAGGGTTCCTATCAGCTCCAATGGGATTTGGCTGGCAACAAAGTTGTTGCAGAGCTATGTACGAGGCTACCACATTCATCACAAGAACAAGTTCTTGTTCATTTGTTGGGAGAAAATTCCTCTCTTTTCAATTTCAGCATGGAAGTTTTAG 1251 0.438 MNWDEEGIRIINLLNECATFTESENFIGADIALYHLSHLVSPDGDSMQRVATYFTEALACCQMTKNLRGVPKVLRLVRTLSTPEQQLVKKLFFDFYPFLKIAHTVTNQTIIEAMQGETAINVLDLSPSNADQWTSLMQGLRERLTNTPYLKITVTAIHEKKEVLEQMGLHLKVEAERLHFHFEFNAVVSSLESLDPETLPIKKGEPLAISCVLQLHSLLAANDDETVKMRGQRVFAEMLVKQKNKKVKPSPDSALSPFSPCPSHKMECFLNGLWRMQPRVMVVTEQESNVNGSSLRERVSKALNFYSTLFDCLEASTSRTWVGRSLLEKMLLGEEIKNIVACEGVERKERHEKLETWIPRLELAGFGRVPISSNGIWLATKLLQSYVRGYHIHHKNKFLFICWEKIPLFSISAWKF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00197 416 Pfam GRAS domain family 11 415 IPR005202 -
Phac11g00197 416 ProSiteProfiles GRAS family profile. 1 415 IPR005202 -
Phac11g00197 416 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 410 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00197 Phac-Chr11 1266466 1267956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00197 4 415 GRAS Transcription Factor Family AT1G50420 43.707 2.65e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00197 GRAS 1.6e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00197 - - vra:106778126 701.819