Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00194 ATGGCAAACAGTGTAGTTACCTTTGTTTTAGATCACTTATCTCAACTTGCGGCACACGAAGCTAATTTGTTGTATGGCGTGGAGGATAGGATCCAGTCCCTCCAGAACGAGCTTCAAATGATCAACGACCTCCTCAATACCTCAAAGAGAAAGAAGGGATATGATAATACAGTGGTGAACCAAATCAGAGATGTGGCCCACCTAGCTGAGGATGTCATTGACACTTTCGTAGCCAAAGTTGCCATTTACAAAAGGAGAACCATGTTAGGAAGGATGCTCTATGGCTTTGCCCAAGCAAGGTTGCTTCACCACGTAGCCGACAAAGTAGAGAAGATGAAAACCACCCTCAACGAAATACGCGACAACAAGGACAAATATTATGCTTTCAAAGAAATCAATAATCAATTCGCAGCAGAAGAGGAAGAGGAGGAGAAGGAAAGGGCGCAATCACTACACAAGCTAAGAAGAAATGTTGAGGAAGAAGATGTGGTTGGCTTTGTCCATGACTCAAAGGTTGTCATCAAACGACTCTTGGAAGGTGGTTCAAATCGTAACGTTGTCTCTATCATTGGCATGGGGGGATTGGGCAAGACCACCCTTGCTCGAAAAGTCTATAACAGCAACGAGGTGAAGCAACACTTCAAGTGTCGAGCATGGGTTTATGTGTCAAATGAGTGCAAAGTTAGGGAGCTTTTGTTTGGTCTTTTTAAGAATTTGATGCCAAATTTTGAAAAACAATGCAAAGGCAAGAAGAAAAGTAAGAAAAGCACTCGAGCCAGTAGTAACTTGAGTGAGGAGGAGCTGAAGAAACTGGTGCGGGACAAGTTGGAGAATAGAAGGTATCTTGTGGTGGTAGATGACTTGTGGAAAAGGCAAGATTGGGATGAGGTGCAAGATGCTTTTCCAGAAAACAACAGAGGTAGCAGAATATTGATCATTAGTCGTTTGAAAGAGGTAGCCCTGCATACTTCCCATGATCTTCCTTACTATCTTCAATTCCTGAGTGAAGAAGAAAGTTGGGAGTTATTTTGCAGGAAAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGGCTCTTGGAAAGAAGATGGTTCAAAGTTGTCGTGGTTTGCCACTCTCCATCATTGTCTTAGCAGGGCTGCTAGCCTACAAGGAAAGGTCACACAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTTACTCAAGATGAGACCCAAGTGAAGGATATAGTTCTCAAACTCAGCTACGACAACTTGCCAAGGAGATTAAAACCATGTTTTCTCTATCTTGGGATATTTCCGGAAGACTTTGAAATCCTAGTTACGCCATTATTGCAAAAATGGGTTGCTGAGGGTTTTATACAAGATACAGGGAATAGAGACCCAGATGAAGTTGCAGAAGACTACTTGTACGAGCTCATCGATCGTAGTTTGGTCCAAGTAGCAAAAGTGAAGACTAATGGAGGTTTGAAGACATGTCAAGTTCATGATCTTCTTCGAGATCTTTGCATATTAGAGAGCGAAGAGGACAAAGTTTTGGAAGTTTGCACAGACAATAACATTCTAATCCTAACAAAACCTCGTAGACTCTCCATTCACAGTAAGATGGGTAACTACATTTCTTCGAGCAACAATGACCATTCATGTATCCGATCCTTGTTCTTATTTGACCCAGATTTCAATGTTAGCGGGACGGACTGGAAATGGCTTTCGAAAGGCTTCAAATTAGTTCGAGTGTTGGAGATTAGACCAACATGGCTTGAGATCCCTTCTAATTTAGGGAACTTTATCCACTTAAGGTATTTGAGAATAGAAACAGATTGTGTTAGTTTTGTTCCAACTTCAATACTTAACCTTTTGAATCTACAAACCATAGACCTAGGTGTTTTGAGGTATCTGACTCCAATTTCTTTCCCTGTCCAAATGTGGAAACTCAAACATTTAAGGCATTTGCATACACCACGACCTATCAAGTTGCGAGGCAGTTGTTCTGGATCATATGAGAAGATGTGGAATCTTCAAACCATCCGTTCTATTATACTCAACAAGCAAGCAAAATATCTGATAAAGAAAGGAACATTTCCCAATCTTAAGAGTTTAAGGTTGGTAGAGGCTTATGGATACAAAGGTGAATTACCCAAAATGTTGCAGAGCCTACAACAATCAAGTCATTTGAATAAGTTAGAGATTATCTTCCTAGATAGGAATGATACAGGAGTAAAGGACAATGTCCGTGATATTGTGGAAAGGAACAATGATTGCAAGCCACAAGAACTGTTACAAAGCTTAGGGCAATTCAATTGTCTAGTTGTCTTACATATTAAGGATGCTTCGGACCTTCTGACTTGTGGGCTCGCATTTCCTCCAAACGTTACAGAGTTAACGTTGTCAGGGATTTGCTACATCACTGATGATGGGATGAATGGTTTGAGAAATCACACCAAACTCAAAATTTTGAGACTTTTGGGAGCTGTATCTTATGATGAGGATTCCTTTGATCTGAATTGTGTGGGAGACAGTTTCCCACAACTGGAAGTGTTTGAAATGAAATATTTGAAAGTTGTTAAATGGAAATTAGGCAATGGTGGAATGCGGAGGCTTCAGAGTGTGACCATCGTCTGTTGTAAAAGTTTAGACAATCTCCCAAATGAACTATGGTCTTTGAGTGGCTTGAGAAAAGTGCAGGTAAGTTATTCCTCAGAACAAATGACTGCGATGCTACGAAATCTGAAAATAAACAATGAGGTTCAACTAGTAATAGAGTGTTAA 2778 0.4064 MANSVVTFVLDHLSQLAAHEANLLYGVEDRIQSLQNELQMINDLLNTSKRKKGYDNTVVNQIRDVAHLAEDVIDTFVAKVAIYKRRTMLGRMLYGFAQARLLHHVADKVEKMKTTLNEIRDNKDKYYAFKEINNQFAAEEEEEEKERAQSLHKLRRNVEEEDVVGFVHDSKVVIKRLLEGGSNRNVVSIIGMGGLGKTTLARKVYNSNEVKQHFKCRAWVYVSNECKVRELLFGLFKNLMPNFEKQCKGKKKSKKSTRASSNLSEEELKKLVRDKLENRRYLVVVDDLWKRQDWDEVQDAFPENNRGSRILIISRLKEVALHTSHDLPYYLQFLSEEESWELFCRKVFRGEDYPSDLEALGKKMVQSCRGLPLSIIVLAGLLAYKERSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFEILVTPLLQKWVAEGFIQDTGNRDPDEVAEDYLYELIDRSLVQVAKVKTNGGLKTCQVHDLLRDLCILESEEDKVLEVCTDNNILILTKPRRLSIHSKMGNYISSSNNDHSCIRSLFLFDPDFNVSGTDWKWLSKGFKLVRVLEIRPTWLEIPSNLGNFIHLRYLRIETDCVSFVPTSILNLLNLQTIDLGVLRYLTPISFPVQMWKLKHLRHLHTPRPIKLRGSCSGSYEKMWNLQTIRSIILNKQAKYLIKKGTFPNLKSLRLVEAYGYKGELPKMLQSLQQSSHLNKLEIIFLDRNDTGVKDNVRDIVERNNDCKPQELLQSLGQFNCLVVLHIKDASDLLTCGLAFPPNVTELTLSGICYITDDGMNGLRNHTKLKILRLLGAVSYDEDSFDLNCVGDSFPQLEVFEMKYLKVVKWKLGNGGMRRLQSVTIVCCKSLDNLPNELWSLSGLRKVQVSYSSEQMTAMLRNLKINNEVQLVIEC* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00194 925 Gene3D - 5 92 - -
Phac11g00194 925 CDD RX-CC_like 2 121 IPR038005 -
Phac11g00194 925 Pfam Rx N-terminal domain 5 81 IPR041118 -
Phac11g00194 925 PANTHER DISEASE RESISTANCE PROTEIN RP 31 878 IPR044974 GO:0006952
Phac11g00194 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 433 IPR027417 -
Phac11g00194 925 Gene3D Ribonuclease Inhibitor 534 922 IPR032675 -
Phac11g00194 925 SUPERFAMILY L domain-like 498 903 - -
Phac11g00194 925 Gene3D - 333 418 IPR042197 -
Phac11g00194 925 PRINTS Disease resistance protein signature 620 636 - -
Phac11g00194 925 PRINTS Disease resistance protein signature 186 201 - -
Phac11g00194 925 PRINTS Disease resistance protein signature 368 382 - -
Phac11g00194 925 PRINTS Disease resistance protein signature 275 289 - -
Phac11g00194 925 Gene3D - 145 327 IPR027417 -
Phac11g00194 925 Pfam NB-ARC domain 172 421 IPR002182 GO:0043531
Phac11g00194 925 Coils Coil 31 51 - -
Phac11g00194 925 Gene3D - 419 508 IPR036388 -
Phac11g00194 925 FunFam Probable disease resistance protein At1g63360 419 508 - -
Phac11g00194 925 FunFam Probable disease resistance protein At5g66910 333 420 - -
Phac11g00194 925 FunFam Probable disease resistance protein At1g61300 145 328 - -
Phac11g00194 925 Coils Coil 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00194 Phac-Chr11 1220192 1223046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00194 187 505 WRKY Transcription Factor Family AT5G45050 24.922 1.87e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00194 - - vra:106779070 1249.19