Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00186 ATGGAGGAGTCGTGCGCGCTGTGCGAGAAGAGGGCGGTGATGCTCTGCGAATCGGACCAGGCGAAGCTGTGCTGGGAGTGCGACGAGAAAGTTCACGGCGCCAATTTCTTGGTGGCGAAGCATTCGCGCGTGCTTCTCTGCCGTTCGTGCCATTCCCCCACTCCCTGGAGAGCCTCCGGCGCCAAGCTCACACCCACCGTCTCCTTCTGTCAACCTTGCGTCGCGAATCAGCATGCCAGGTTGCACCGATTGGTCAACAATGTCTGCCAACAGCACAAAGAAGAAGGGGAGAACGAACCGCTCCCAGTCTCCTCCGCTTCCGCCACGTCACCACAGAGTGCTTCGAGTTTATCATTCAAACGATTGAGAAGTAACTCTTTCTCCATGGATTCCCATGATGGGAAAGCGTGTTCTTCGTGA 420 0.5667 MEESCALCEKRAVMLCESDQAKLCWECDEKVHGANFLVAKHSRVLLCRSCHSPTPWRASGAKLTPTVSFCQPCVANQHARLHRLVNNVCQQHKEEGENEPLPVSSASATSPQSASSLSFKRLRSNSFSMDSHDGKACSS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00186 139 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Phac11g00186 139 SMART bboxneu5 1 46 IPR000315 GO:0008270
Phac11g00186 139 MobiDBLite consensus disorder prediction 96 117 - -
Phac11g00186 139 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 95 - -
Phac11g00186 139 MobiDBLite consensus disorder prediction 102 117 - -
Phac11g00186 139 CDD Bbox1_BBX-like 5 46 - -
Phac11g00186 139 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00186 Phac-Chr11 1163063 1163793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00186 1 83 C2C2-CO-like Transcription Factor Family AT4G27310 60.241 5.71e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac11g00186 zf-B_box 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00186 - - gmx:100818267 180.644