Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00164 ATGAAGAGATTGAGGTCGAGCGATGATCTTCACTCGTACGGCGGCGACAAGAATAGCAATGGTTGTAAGGATTCCGGTAATCTGAACCGTTCGTTTTCGTCGGCTCAGCGGAGTTTCTATTACAAGCCCGATAATGCGCGCAAGGGTTTGGTCTCGTCTTCGTCGTCCCGGTACGAGAGGGATCGGGCGGTTGAGGAGGATCGGGAGGGTTCTAGGGTGGTTCGGAAGCGATCTGAGCACGATTTCGAGGGATTTGATAGGAGGAAAGGGTTCGATCGGTATAGGGATAGTGATCGGAGTTTGATGCACCGGTCGGAGAGTTTCTGTAGCGGTGGGTCGCGGAGGGATCAGTTTCCGAAGGGTTTTCGGTCGGAGAGGGATAGGTCGCGGAGGGAGGGGAGTGTGTCGTCTTGGCGGAGAGGGTTGAAGGATTTGGATGAAAGGGAGAGGGTGGTGCGTTCGCCCAAGGGTTTGAGGGATGTGAAGTCTCCGTCTTGGTCCAAGGATTCTGTTTCGGAAAGCGAGCAATCTAAGAAGAGATCTTCTTCTCCCAGACCCTTCAGAGAGGGTAACTCGAACAAGTCTAAGTCTAAGTCTCCCACTTGGTCTAAGGATTCTGTTTCGGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAAGCTGAAGAGGAGTTGTTGCAGCAGGTTCAGAGTGGGAGTAGTAGTGAGATGGAAGAAGGGGAGCTTGAACCTGAACCCCAAACGGAAATGATTGCTCCTGCGAGTGAAGACTTGACCCCCTCTGTTACTTTGGAGGCTGATGAGAAGCAAGTTCAGAAGAATGAATGCCACCCCGATGATGATGACACTGAGGCTATCATGCACGAGAATCAGGAGTTGTCGACTAAGGAAGAAGTGAAACCTAAGGAGGAGGTTGGTTGTGAGGTTAAGGATGCAGACAAAGAGTCTGATAAAGTGCCTGATATTCAGGAGGATCCGACCGACAAAATGGCCGTTACTGAAACTGAACCTGGTTCTGTGGGGAATGGTAATGACGATAAAAGAGAGGAGTGTTTGGATGTCGGTGCTGAGTGCGAGGAGGAAACAAAGAAGGGTGGGGATGTGGAGAAGGAGAAGGTGGTGTTGAATGAAGAGGAGTCTAAAGAGGACAAGGGTGTAGATCTCGGAACCAGGACGGATGTTATAAAACCTGAGTTAAATGATGGAGTATCAACAGAAAATGAAGTCCCCAAGGAAGTGGACAGAGAAGTGACGATGGTGGGGGTGGTCAACAATGTGAAGGATAAGGGGAAAGGAATTTCTGTTGCACTTGCACCTCCTACTGATGTTGCTCATTCTTCGGATGATGGCTTGTGGATGGACAGAGGATCGATGGACCTCCCAACGTGTTCTGTTGATGTTATAGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTCTCCAGATCTCCTGTAAGGAAAGTGGAGAAAGTGGACCACTCGGTTCTTTACAAGCACAAGGATGACATGGAGCAGCTTGATCTCACTCTTAGCTTGCCGAATGTTTTGTTACCTATTGGTGCTCAAGAGACTGGAGCTCATGAAACAACATCACAAGCTCCTGGATCCCCCAGTCAAGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTACCAACTCAGATGGTTTTCCTGCATCAATGTCCCTTTCAGGTTCCCAATCATTTTATCACAATCCAAGCTGTTCTTTGACAAAAAACTCTGTGGACTACGAACAATCTGTTGGCAGTCGCCCTTTGTTCCAGGGAATAGATCAAGTTTCCCAGGGGTGTTGGCAAGGCCAGTCTCAGAGTGATCCTAAACAGAAAGAAGTTCCTCTTGGTCAAAGAACATCGGTTAATGGAAATGGCTCCCTTTTCCAGTCTCAGACATCGTGGGGTGTTTTAGACAGTCAAGCTGTGAAGGGTCAACATTCCAGAGTTCTAGAAGGCAGTTCAAAAATTGCTGGTGGACTTGATAGGCAATTGAGTTTTCACAAGCAGTTTTCAGGGCAATCAAGACGCCATGATGATGTTAGATCTCCGCCACAGAGTGTTGGGTCTCATGATATTGGATCAAATTACAGCTTTGAGAAAAAGAGGGAGGTTAGAGACAGGAGTAGTGGTAGTCTGTATCGAACTACCAGCCAGAAGGAACAAGAACAACCAATGATGGGTGGAGCTGATTTTGTCGAGACAATCATTGCAAGAATTGTTTCTGAACCTGTTCATGCAATGTCCAGAAAATTTCATGAAATGACAGGACAGTCCATAACATGTCTGAAAGAGGGTATTCGTGAAATCATGCTCAATGCTGATAAGCACGGGCAGATACTTGCTTTCCAAAAAGTTCTTCAGAACAGGTCTGATGTAATCTTGGATGTTCTGTTGAAGTGCCACCGAGTGCAACTGGAAATTTTGGTTGCTTTGAAAACTGGTTTAACTCATTTCCTTCACTTAGACAGCAGCATTTCGTCTTCTGAGTTGGCTCAAATTTTTCTGAACTCAAGGTGTAAGAATGTTTCATGTCGAAGTCAGTTACCCGTAGATGAATGTGATTGCAAGGTTTGTGCGCAGAAGAATGGTTTTTGCAGGGAATGTATGTGCCTTGTGTGTTCTAAGTTTGACAATGCCTCAAATACATGTAGCTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACAAAAGGGATGGCTGAAATGCAGTTTCACTGTATTGCTTGTGACCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTTTTTCATAATTTTGCAAAAGAATGGTCTGTTGAAGCCCTTTGCAAAGAGCTTGAATATGTGAAGAGAATTTTTTCTGCTAGCAAGGATATGAGAGGGAGACAGTTGCATGAAATTGCAGAGCAAATGCTGCCAAGGTTGGCAAATAAGTCTAATCTTTCTGAGGTTTTGAGGCACATCATGTCTTTCCTTTCGGATGGTGATTCTTCCAAATTAGCCATGACAGCAAACTTTCCTGGGAAGGAGCAAATTAAAGAAAACAATGGAGTAGCAGGGCCTAGCCAGGAACCAGCTTGGATGAAATCTATTTATTCAGAAAAGCCACCTCTGTTAGAGAGGCCAGCGAATATCCTTCCTAGCTTTGACCAGAATGATAAAAGAACTCTTGCGCAAGAGTTGCAGATGAGTAGCATCCAGAAGGACTACTGTTTTGACGAATTGGAGAGTGTAGTAAAAGTTAAACAGGCAGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGATGCTGAAAAGTTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAATTGAGGAAGAATATGCCAATCGAATTGCCAAGTTGCGATTGACTGAGACTGATGAAATTCGTAAACAAAAATTTGAAGAAGCCCAAGCATTAGAGAGGGCACATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGACAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTGCCATGTGA 3576 0.4536 MKRLRSSDDLHSYGGDKNSNGCKDSGNLNRSFSSAQRSFYYKPDNARKGLVSSSSSRYERDRAVEEDREGSRVVRKRSEHDFEGFDRRKGFDRYRDSDRSLMHRSESFCSGGSRRDQFPKGFRSERDRSRREGSVSSWRRGLKDLDERERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSPRPFREGNSNKSKSKSPTWSKDSVSESEQSKSVEVKKAEEELLQQVQSGSSSEMEEGELEPEPQTEMIAPASEDLTPSVTLEADEKQVQKNECHPDDDDTEAIMHENQELSTKEEVKPKEEVGCEVKDADKESDKVPDIQEDPTDKMAVTETEPGSVGNGNDDKREECLDVGAECEEETKKGGDVEKEKVVLNEEESKEDKGVDLGTRTDVIKPELNDGVSTENEVPKEVDREVTMVGVVNNVKDKGKGISVALAPPTDVAHSSDDGLWMDRGSMDLPTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHSVLYKHKDDMEQLDLTLSLPNVLLPIGAQETGAHETTSQAPGSPSQARSVQSLSNTFCTNSDGFPASMSLSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQVSQGCWQGQSQSDPKQKEVPLGQRTSVNGNGSLFQSQTSWGVLDSQAVKGQHSRVLEGSSKIAGGLDRQLSFHKQFSGQSRRHDDVRSPPQSVGSHDIGSNYSFEKKREVRDRSSGSLYRTTSQKEQEQPMMGGADFVETIIARIVSEPVHAMSRKFHEMTGQSITCLKEGIREIMLNADKHGQILAFQKVLQNRSDVILDVLLKCHRVQLEILVALKTGLTHFLHLDSSISSSELAQIFLNSRCKNVSCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMAEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVEALCKELEYVKRIFSASKDMRGRQLHEIAEQMLPRLANKSNLSEVLRHIMSFLSDGDSSKLAMTANFPGKEQIKENNGVAGPSQEPAWMKSIYSEKPPLLERPANILPSFDQNDKRTLAQELQMSSIQKDYCFDELESVVKVKQAEAKMFQSRADDARRDAEKLKRIALAKNEKIEEEYANRIAKLRLTETDEIRKQKFEEAQALERAHLEYLNMKRRMETDIKDLLSKMEATKMSLAM* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00164 1191 CDD PHD_OBE1_like 873 929 IPR047578 -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 524 543 - -
Phac11g00164 1191 Pfam PHD - plant homeodomain finger protein 843 963 IPR032881 -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 210 224 - -
Phac11g00164 1191 Pfam Coiled-coil region of Oberon 1064 1179 IPR032535 -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 1 29 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 341 390 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 118 157 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 603 622 - -
Phac11g00164 1191 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1188 IPR004082 -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 699 713 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 268 331 - -
Phac11g00164 1191 Coils Coil 1099 1130 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 43 79 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 102 390 - -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 808 823 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 834 855 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 880 900 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 793 808 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1086 1106 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1125 1147 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 950 969 IPR004082 -
Phac11g00164 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 754 776 IPR004082 -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 673 729 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 186 209 - -
Phac11g00164 1191 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00164 Phac-Chr11 1056283 1061696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00164 843 988 PHD Gene Family AT5G57380 26.712 2.82e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00164 - - gmx:100817003 1962.58