Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00110 ATGGCCACAATTTCTTCGGATGAGAAGGTTTTTTGTCAATTTACATCAAATCTAAGGGTTCTTGCCATTGACACTGACCCTTCAGTTCTTGAATTCATCAAGAAAATCTGCAATGAATGTGGTTATGAAGTTATGACATGCACAGATTCGTTACGTGCTGCTGAAATTTTCAGGGACAGAAAAGCGAGTTTTAATTTGGTGCTGATGGAGGTTCATATGCCAAACATGGATGCATATGAGTTCCTTGTGAACCAGAAAATGGATGTTCATGTCATCATGATGTCTTTTGATGATGATAAGAAATCTGTAATGAAGGCTATTAAACTTGGAGCTTGTGATTATTGGATCAAGCCTTTGCATGAGGATCGAATCAAGAATATGTGGACACATATTGTTAGGAAGTCCATGAGTGAGAACAAGATGCAGAAAAACATCATTGGCAACTTGGAAGATGATGGTGATCAGAGAAAAATGATTAGTAGTGATGATTCTACATTTGTTTTTTCTTCCACTGTTGAAATTCCAAGAGAAGTTGATAATGTTGGTGAATCTGAGAACCGTGGCAGAAAAAAGGCTCGAATAGTATGGACATCAGAACTGCATCGTAAATTTGTTGAAGTTGTGGATCAAATTGGACCTGCTAGTATGATTCTTTAA 657 0.3714 MATISSDEKVFCQFTSNLRVLAIDTDPSVLEFIKKICNECGYEVMTCTDSLRAAEIFRDRKASFNLVLMEVHMPNMDAYEFLVNQKMDVHVIMMSFDDDKKSVMKAIKLGACDYWIKPLHEDRIKNMWTHIVRKSMSENKMQKNIIGNLEDDGDQRKMISSDDSTFVFSSTVEIPREVDNVGESENRGRKKARIVWTSELHRKFVEVVDQIGPASMIL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00110 218 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Phac11g00110 218 SMART REC_2 18 128 IPR001789 GO:0000160
Phac11g00110 218 Gene3D - 17 147 - -
Phac11g00110 218 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Phac11g00110 218 SUPERFAMILY CheY-like 16 142 IPR011006 -
Phac11g00110 218 Gene3D - 188 217 - -
Phac11g00110 218 CDD REC_typeB_ARR-like 20 132 - -
Phac11g00110 218 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 209 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00110 Phac-Chr11 734579 735406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00110 14 212 Response Regulator Gene Family AT4G16110 37.383 6.69e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac11g00110 Response_reg 3.1e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00110 - - pvu:PHAVU_011G008200g 405.601