Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00106 ATGATCTTCCATACATCTTATACCTGCCTTGCAAAGGCAATTCCAGCTATGTTGGTGCTTTTGCTGGCTATGTCTGAAGGCACTTCAGGACTCACACAAGCTGATGCACTTCTTAGATGGAAACAAAGTCTACCTCACCAACCAATTCTGGATTCCTGGGTGATCAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCACTGTCACTATAATCAACTTGGCTTATACTGGACTTGCAGGTACCCTTCACAATCTGAACTTTTCTCTTTTTCCAAACCTTCTTCGTCTTGACCTCAAAGTAAACAACCTCACTGGCTCCATACCACAAACCATTGGGGTGCTCTCAAACCTCCAGTTCCTTGACCTTTCCACCAACTATCTCAATGGCACTCTGCCTCTTTCCATTGGCAATCTGACTCATGTTTTTGAGCTTGATGTTTCAAGAAATGATATATCGGGGGTATTAGACCCTGCCCTTTTTCCTGATGGATCTCACACCCCCAAAACTGGCCTCATTGGTATCAGGAACCTTCTCTTCCAAGACACCTTGCTAGGTGGAACAATCCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACAACTTCTATGGTCCTATTCCTCCATCTCTAGGCAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGTCCAATACCTCCAAGTATTGGTAAACTAACCAATCTAACCGATGTGCGCCTTTTCACCAACAACTTAAATGGTAGTGTTCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAGAACAACTTCGTTGGTGAATTACCACCACAAGTGTGCAAAAGTGGGAAACTTGTAAATTTTAGTGCAGCCTTTAATAGCTTCACTGGCCCAATTCCAAGAAGCCTCAGAGACTGTCCTTCCTTGTACAGGGTTCGACTTGAATACAACAGTCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTCAGCCATAACAGGGTGGAAGGTAACCTCACTGCAAAATGGGGTGCCTGCAAAAACTTGCAATATCTCAGCATGGCTGGGAATGGAGTAAGTGGCAACATTCCAAGTGAGATTTTTCAGTTGGAACAACTACAAGAGCTTGATCTATCCTCCAACCAGATATCAGGAGAGATTCCTCCACAGATAGGAAACTCAACCTTGTATGAATTAAATTTGAGTGAAAACAAACTCTCTGGCATGCTACCAGCAGAAATTGGAAAGCTTTCCAATTTGGGATCCTTAGACCTTTCTATGAACATGCTACTGGGACCAATCCCCAAACAGATAGGGGGCATCTCCAACTTGCAGAATTTAAATCTTAGCAACAATAACTTTAATGGCTCAATCCCCTACCAAGTTGGAAATCTTGCATCTTTGCAAGATTTTTTGGACTTGAGTTACAATGAACTTTCAGGAGAAATTCCTTCTGATCTTGGGAAGCTTTCAAATTTGGTAAGCTTGAATATCTCTCACAACAATCTGTCAGGTCCAATCCCTGACTCCCTTAGTAAACTGGTGAGTTTGTCAGCCATCAACCTATCCAACAACAATTTGGAGGGTCCAGTTCCTGAAGGTGGCATATTCAACTCTTCTCATCCCGTGGATTTGAGCAACAACAAAAATTTATGTGGGAATATTCAAGGTTTGCAACCCTGTAATGTCTCTCTCACTAAACCTGATGTTGGTGGATCAAGTAACAAAAACAAGGTTGTGATCCCAATAGTTACATCCTTGGGAGGTGCTCTTATTATTTCTCTGGTGTGTGTTGGGATTGTGTTTTTCTGCTGCAAGAGAAAATCAAGAGCTCGAAGACAAAAAAGTTCAATAAAAAAACTGAATCCATTTTCCATTTGGTACTTCAATGGCAGAGTTGTGTATGGAGACATAATTGAAGCTACCAAGAACTTTGACCCCCACTATTGCATTGGGGAAGGAGCACTGGGAAAAGTGTATAAAGCAGAGATGAAAGGTCAAGTATATGCTGTAAAAAAGTTGAAGTGTGATGAAGAAAACTTAGACATTGAGAGTATAAAAACCTTTCAGAATGAGGTAGAAGCAATGTCAGAAACACGCCATCGAAACATTGTGAAGCTTTATGGATTTTGCTCTGAAGGGATGCACACATTTCTAATTTATGAGTATATGAATAGAGGGAACTTAGCAGACATGCTGAGAGATGAAAAGAATGCATTAGAACTAGATTGGTCCAAGAGGGTTGACATTGTGAAAGGTGTAGCAAGTGCTTTGTCCTATATGCATCATGATTGTGCTCCACCTTTGATTCACAGAGACATATCAAGCAAGAACATTTTACTCTCCTCCAATCTTTCAGCTCACGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCAGATTCTCCTATTTGGACATCATTTGCCGGCACATATGGTTATGCTGCTCCAGAGCTAGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTTTGGCTTTTGAGGTTCTTACGGGGAAGCACCCTGGTGAACTTGTTTCCTACATACAAACTTCGAGTGAACAGAAAATAATCTTCAAAGAGATTTTGGACCCTCGTCTCTTGCCTCCTTCTAAGAACAATATTTTGAAGGATTTGGCATTGATTGCGAACCTTGCTCTTTCATGTTTACAAACCAATGCTCAATCTCGACCAACTATGCGATACATTGCTCAATTCCTTGAAATGGATACGTGCTGA 2835 0.4169 MIFHTSYTCLAKAIPAMLVLLLAMSEGTSGLTQADALLRWKQSLPHQPILDSWVINSTATTQTPCSWRGITCDSQGTVTIINLAYTGLAGTLHNLNFSLFPNLLRLDLKVNNLTGSIPQTIGVLSNLQFLDLSTNYLNGTLPLSIGNLTHVFELDVSRNDISGVLDPALFPDGSHTPKTGLIGIRNLLFQDTLLGGTIPNEIGNIRNLTLLALDGNNFYGPIPPSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRLFTNNLNGSVPQEFGNLSSLIVLHLAENNFVGELPPQVCKSGKLVNFSAAFNSFTGPIPRSLRDCPSLYRVRLEYNSLTGFADQDFGVYPNLTYMDFSHNRVEGNLTAKWGACKNLQYLSMAGNGVSGNIPSEIFQLEQLQELDLSSNQISGEIPPQIGNSTLYELNLSENKLSGMLPAEIGKLSNLGSLDLSMNMLLGPIPKQIGGISNLQNLNLSNNNFNGSIPYQVGNLASLQDFLDLSYNELSGEIPSDLGKLSNLVSLNISHNNLSGPIPDSLSKLVSLSAINLSNNNLEGPVPEGGIFNSSHPVDLSNNKNLCGNIQGLQPCNVSLTKPDVGGSSNKNKVVIPIVTSLGGALIISLVCVGIVFFCCKRKSRARRQKSSIKKLNPFSIWYFNGRVVYGDIIEATKNFDPHYCIGEGALGKVYKAEMKGQVYAVKKLKCDEENLDIESIKTFQNEVEAMSETRHRNIVKLYGFCSEGMHTFLIYEYMNRGNLADMLRDEKNALELDWSKRVDIVKGVASALSYMHHDCAPPLIHRDISSKNILLSSNLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGKHPGELVSYIQTSSEQKIIFKEILDPRLLPPSKNNILKDLALIANLALSCLQTNAQSRPTMRYIAQFLEMDTC* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00106 944 SUPERFAMILY Protein kinase-like (PK-like) 646 940 IPR011009 -
Phac11g00106 944 FunFam Nuclear pore complex protein NUP107 31 170 - -
Phac11g00106 944 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Phac11g00106 944 PANTHER LEUCINE RICH REPEAT KINASE 2 91 235 - -
Phac11g00106 944 ProSiteProfiles Leucine-rich repeat profile. 399 421 IPR001611 GO:0005515
Phac11g00106 944 Gene3D Ribonuclease Inhibitor 29 112 IPR032675 -
Phac11g00106 944 Gene3D Transferase(Phosphotransferase) domain 1 751 943 - -
Phac11g00106 944 ProSitePatterns Tyrosine protein kinases specific active-site signature. 796 808 IPR008266 GO:0004672|GO:0006468
Phac11g00106 944 SMART LRR_typ_2 124 148 IPR003591 -
Phac11g00106 944 SMART LRR_typ_2 397 421 IPR003591 -
Phac11g00106 944 SMART LRR_typ_2 277 301 IPR003591 -
Phac11g00106 944 SMART LRR_typ_2 517 541 IPR003591 -
Phac11g00106 944 SMART LRR_typ_2 253 276 IPR003591 -
Phac11g00106 944 SMART LRR_typ_2 468 492 IPR003591 -
Phac11g00106 944 ProSiteProfiles Protein kinase domain profile. 672 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00106 944 SUPERFAMILY L domain-like 52 364 - -
Phac11g00106 944 Gene3D Ribonuclease Inhibitor 367 462 IPR032675 -
Phac11g00106 944 FunFam Predicted protein 177 265 - -
Phac11g00106 944 Gene3D Ribonuclease Inhibitor 113 173 IPR032675 -
Phac11g00106 944 Gene3D Ribonuclease Inhibitor 179 366 IPR032675 -
Phac11g00106 944 Pfam Leucine Rich Repeat 519 541 IPR001611 GO:0005515
Phac11g00106 944 SUPERFAMILY RNI-like 270 563 - -
Phac11g00106 944 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 750 - -
Phac11g00106 944 SMART serkin_6 672 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00106 944 FunFam Leucine-rich repeat receptor-like protein kinase TDR 274 590 - -
Phac11g00106 944 Gene3D Ribonuclease Inhibitor 463 588 IPR032675 -
Phac11g00106 944 PRINTS Leucine-rich repeat signature 397 410 - -
Phac11g00106 944 PRINTS Leucine-rich repeat signature 127 140 - -
Phac11g00106 944 Gene3D Phosphorylase Kinase; domain 1 632 750 - -
Phac11g00106 944 Pfam Protein kinase domain 677 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00106 944 FunFam MDIS1-interacting receptor like kinase 2 751 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00106 Phac-Chr11 717403 720825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00106 3 844 Receptor kinase-like Gene Family AT4G08850 39.195 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac11g00106 Pkinase 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00106 - - gmx:100814345 1573.14