Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00098 ATGAAACGGGGAAGAGAAGAGAGCATGGAGGAATCGAGTTCTAGGGTTTCGCCCACTCTTCAGCATCCCACAGCAGGCATCATCAAGCGACTTCGCCTCGAGAACTTCATGTGTCACTCCAAACACGAGACTGAGTTCGGAAACCATGTCAATTTCATCACCGGCCAAAACGGAAGTGGTAAGAGTGCAATCCTAACTGCACTGTGTGTTGCATTTGGCTGTCGGGCCAAAGGAACTCAAAGAGCATCCTCTTTGAAGGATTTCATTAAAACTGGTGCCAGTAATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATATATGGTGACGTTATCAATGTAGAACGTAGGATATCTGAATCCACAAGTTCTACTACATTAAAAGATCACCAAGGAAGGAAAGTTGTTAGTCGAAAAGCAGAGCTTCTAGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGACTCAAGACAAAAGCAGGGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGATCTGCTGGAAAGCATTTCCAAGGAAATTACTATGGCATATGAAGTAATTAAAGAGTTAGAGACTGCAATAAGGCCCATAGAGAATGAACTTAACGAGCTGCAAGTTAAAATTAGAAACATGGAACATGTTGAACAAATATCCATACAGGTTCAGCAGTTAAAGAAGAAACTTGCATGGTCGTGGGTTTATGATGTGGACAAGCAACTAGAGGAACAAAATATAAAGATTGAAAAGTTGAAGAACCGGATACCTACCTGCCAGGCTAAGATTGATCAACAACTGCATTTGGTTGAAAAGTTGAAGGAAAGCTGCTCCAAGAAGAGGGATGAAATTGCAAGAATGTTGGAGAAGACATCACAAGTTAAGCAAATGAAGGAAAATTTAAACCAATCTGTGTCCATGGCAAAGAAAGAGGCATTTGAACTTGAGCGAGACTGCAAAAGCAAAACTAGCAACATACAGAAGATGGTACGTCAACTTAAACTGCTTGAACAACAAGTACAGGACATTCGCGAGCAGCATGCAAAAAATACTCAGGCTGAAGAATCTAACGTGGAGGAGAAACTGAAGGTGCTTAAAGATGAGGTTCATGCAGCTGAGTTAAAGCTGAAGGGATTGAAAGAAGAAGATGCTTCTCTAATGGAGAGCATACGTAGGCAAAATGATGAAATCCAAAAGATAGCTGATAAGATTCATGATCATGAAAAAAATCACCATGCTATCATGTGTCGAATCCGTGATCTTCAACAACATCAAAGCAATAAGATTACTGTTTTTGGAGGAGGCAAAGTAATCAATTTGTTACAAATAATTGAGAGACACCACCAAAGGTTTAAGATGCCTCCAATTGGTCCAATTGGTGCCCATCTGAAGCTTCTTCATGGTAATAAATGGGCACTTGCCCTTGAATATGCTATTGGGAGATTGCTCAATTCTTTTATAGTGACTAATCATGCGGATTGTCGTCTTTTGAAACAATGTGCGAAGGAAGCTAACTATGGTCACCTTCAAATTATTATTTATGATTTTTCAATCCCAAGGTTGACGATACCACAACATCTGCTTCCTAATACAGAACATCCATCAATTCTTTCTGTCTTACAATGTGAAAATCACACTGTGATTAATGTCTTAGTGGATCAGGGAAATGTTGAGAGACAAGTTCTAGTCAAGGATTATGAAGTTGGGAAAGTGATTGCCTTTGAGCGAAGGATCCACAATTTGAAGGAGGTCTACACAGCAAATGGATGTAGAATGTTTTCTCGAGGTCCAGTGCAGACTGTTCTTCATCCAAATAAGAGGCAAAGAACTGGTCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAGAAACTTCATGCTGAAGCATCTGATGAACAAAGGGTTGCCAATGAATGTAAAAGAAATAAAAGAGTGGCAGAAGTCAAGCTTGAGGAACTTGACAAAAATATGAGTTCTATTAAGAGACAATGTGTAAATGCTGGTAAAAGTTTTACTTCTAAGAAGCTAGCTCTGGAGGAAGAAATGCATTTGCACACTGCTGAAAATAGTGCAACACCTTTGTCCTCTGTTGATGAGCTTGTTGAAGAAATTTCAGACATCCGGAAAAAAATAGAAGAAGAACAAGTTTTGCTAGAGGGCCTTCAGCAAAAGGGGCTTGAAGCAGCAGGAAAAGCAGATGATCTTAAAGTAAAATTTGACAAACTGTGTGAATCAGCGAATGGTGAAATTGCTGCCCTGGAGAAAGCTGAGAGTGAACTTGTAGAAATTGAAAAAGAAATGGGTTCTGCAAAAAAGGCAAAGGATCATTACGAGGGTGTCATGAAAAACAAGGTCCTACTTGATATTGAGGAGGCAGAGAACCACTCTCAGGAGCTTACAAAGAAGCGCAAGGAAAGCGTTGAAAAGGCTTCCATAATATGCTCTCAGAATGAACTTGATTCATTAGGAGGTTGTGATGGGAATACCCCGGAGCAAATCAGTGCTCAATTAGGAAGACTTAATCAGACACTTATGCGTGAGAGTCAAAGGTACTCTGAATCAATCGATGATCTTAGGATGCTGTATAAGAAAAAAGAGCGTAAGATTATGAAAAGGCAGCAAGTTTACAAAACCCTTCAACAGAAATTGGATGCTTGCCAGAGAGCCTTGGAGTTACGAACGAGAAAGTTTCAGAGAAATGCAACATATCTGAAGCACCAACTTTCTTGGAAATTTAATGGCCATTTGAGAAAGAAGGGGATTAGTGGACTTATCAAAGTTAATTATGAACAGAAAACCTTAATGATTGAGGTACAAATGCCACAAGATGCGTCAAACAGAGCCGTTCGAGATACTAGGGGGCTTTCAGGTGGGGAGCGTTCTTTTTCAACATTGTGCTTTGCGTTGGCGCTTCATGAAATGACAGAGGCCCCTTTTAGAGCAATGGACGAATTTGATGTCTTCATGGATGCAGTAAGCAGAAAAATCAGCTTGGACACTCTAGTTGATTTTGCGGAGGCGCATGGATCACAGTGGATATTCATCACTCCGCATGATACTAGCATGGTGAGGACCGGAGACAGGATAAAAAAGATGCAGATGGCTGCTCCTCGTTCTTGA 3195 0.4006 MKRGREESMEESSSRVSPTLQHPTAGIIKRLRLENFMCHSKHETEFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASSLKDFIKTGASNAVIQVEIQNEGEDAFKPEIYGDVINVERRISESTSSTTLKDHQGRKVVSRKAELLEIVEHFNIDVENPCVIMTQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISKEITMAYEVIKELETAIRPIENELNELQVKIRNMEHVEQISIQVQQLKKKLAWSWVYDVDKQLEEQNIKIEKLKNRIPTCQAKIDQQLHLVEKLKESCSKKRDEIARMLEKTSQVKQMKENLNQSVSMAKKEAFELERDCKSKTSNIQKMVRQLKLLEQQVQDIREQHAKNTQAEESNVEEKLKVLKDEVHAAELKLKGLKEEDASLMESIRRQNDEIQKIADKIHDHEKNHHAIMCRIRDLQQHQSNKITVFGGGKVINLLQIIERHHQRFKMPPIGPIGAHLKLLHGNKWALALEYAIGRLLNSFIVTNHADCRLLKQCAKEANYGHLQIIIYDFSIPRLTIPQHLLPNTEHPSILSVLQCENHTVINVLVDQGNVERQVLVKDYEVGKVIAFERRIHNLKEVYTANGCRMFSRGPVQTVLHPNKRQRTGRLCGSFEDEIEKLHAEASDEQRVANECKRNKRVAEVKLEELDKNMSSIKRQCVNAGKSFTSKKLALEEEMHLHTAENSATPLSSVDELVEEISDIRKKIEEEQVLLEGLQQKGLEAAGKADDLKVKFDKLCESANGEIAALEKAESELVEIEKEMGSAKKAKDHYEGVMKNKVLLDIEEAENHSQELTKKRKESVEKASIICSQNELDSLGGCDGNTPEQISAQLGRLNQTLMRESQRYSESIDDLRMLYKKKERKIMKRQQVYKTLQQKLDACQRALELRTRKFQRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEQKTLMIEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQWIFITPHDTSMVRTGDRIKKMQMAAPRS* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00098 1064 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 8 1063 - -
Phac11g00098 1064 SUPERFAMILY Smc hinge domain 434 604 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Phac11g00098 1064 Coils Coil 261 288 - -
Phac11g00098 1064 Pfam RecF/RecN/SMC N terminal domain 28 1059 IPR003395 -
Phac11g00098 1064 Coils Coil 771 798 - -
Phac11g00098 1064 Coils Coil 807 834 - -
Phac11g00098 1064 Coils Coil 647 688 - -
Phac11g00098 1064 Coils Coil 324 436 - -
Phac11g00098 1064 MobiDBLite consensus disorder prediction 1 21 - -
Phac11g00098 1064 Coils Coil 722 749 - -
Phac11g00098 1064 Coils Coil 296 316 - -
Phac11g00098 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 1057 IPR027417 -
Phac11g00098 1064 Coils Coil 215 242 - -
Phac11g00098 1064 Coils Coil 887 907 - -
Phac11g00098 1064 Gene3D - 27 232 IPR027417 -
Phac11g00098 1064 Gene3D - 794 1061 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00098 Phac-Chr11 653176 675580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00098 9 1064 Structural Maintenance of Chromosomes family AT5G61460 58.790 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00098 K22804 - gmx:100816916 1791.93