Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00081 ATGGACTTGAAGTCAAATCATACTCCTGTTCTCACTGATTCTGCACCCGTAACAAAGTCTAGGCTGTGCGTGCATTCCAGTTTGTTGCCTTACTCCCATTCCGGGGCAACCTTTACGCATGGAATGTTACTGACTATCCCGAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTCTAGTGGTTGGTTGGATGCCATGAAATCATCTTCGCCTCCAGCCAGAAAGATAACAAAGGATGTTAGCCATGGGTTTGCATCATCTGATTCTGATACTGCTGGTGCTTATTTTAGCTGGCTGCTAAAATACCCATCTGCGCTTACATGTTTTGATCAAATCACAAACTATGCAAAAGGGAAAAGAATTGCATTGTTTATGGATTATGATGGAACTCTTTCCCCAATTGTGGATAATCCTGACTGTGCGTTCATGTCGGACAATATGCGTGCTTCTGTTAAAAAGGTGGCGGAATATTTTCCAACAGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATATCAATTTGTAGGACTAACCGAACTCTACTACGCTGGTAGTCACGGGATGGACATCATTGGCCCTGTTAGACAATCTGAATCTGATAATCACCCAAATTGTATTAGGTCTACAGACAAGCAGGGTAAGGAAGTAAATTTATTCCAACCTGCTGCGGAATTTCTGCCCATGATTAATGAGGTCCTCAAGTCTCTTGATGAGTGTACCAAAGACATTAAAGGTGCTAAAGTAGAGAACAATAAATTTTGCGTATCTGTGCACTACCGGAATGTTGATGAAAAGTATTGGGATGTGGTGGGGCAACGTGTTCATGATGTTCTGAAGGGATATCCGCGTTTGCGGTTAACTCATGGGCGGAAGGTTTTAGAGATCCGACCTGTGATTAACTGGGATAAGGGAAAAGCTGTCACGTTTTTACTTGAGTCACTTGGGCTAAACAATTGTGATGATGTGCTTCCTATATATATTGGAGATGATCGAACAGACGAAGATGCATTTAAGGTTTTGAGAGAGGGGAATAAAGGTTATGGGATCTTGGTGTCTTCATCACCAAAAGAAAGCAACGCAATTTACTCTCTTCGTGATCCATCAGAGGTCATGGAATTTCTCAAGTCACTAGTGTTATGGAAGTCAAGCTGCTTAAAAAGTCTTATATAG 1170 0.4171 MDLKSNHTPVLTDSAPVTKSRLCVHSSLLPYSHSGATFTHGMLLTIPRKKTGILEDVRSSGWLDAMKSSSPPARKITKDVSHGFASSDSDTAGAYFSWLLKYPSALTCFDQITNYAKGKRIALFMDYDGTLSPIVDNPDCAFMSDNMRASVKKVAEYFPTAIISGRSRDKVYQFVGLTELYYAGSHGMDIIGPVRQSESDNHPNCIRSTDKQGKEVNLFQPAAEFLPMINEVLKSLDECTKDIKGAKVENNKFCVSVHYRNVDEKYWDVVGQRVHDVLKGYPRLRLTHGRKVLEIRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSSPKESNAIYSLRDPSEVMEFLKSLVLWKSSCLKSLI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00081 389 NCBIfam trehalose-phosphatase 118 378 IPR003337 GO:0003824|GO:0005992
Phac11g00081 389 Pfam Trehalose-phosphatase 124 368 IPR003337 GO:0003824|GO:0005992
Phac11g00081 389 FunFam Trehalose 6-phosphate phosphatase 121 211 - -
Phac11g00081 389 CDD HAD_TPP 122 372 - -
Phac11g00081 389 FunFam Trehalose 6-phosphate phosphatase 222 298 - -
Phac11g00081 389 FunFam Trehalose 6-phosphate phosphatase 228 387 - -
Phac11g00081 389 NCBIfam HAD-IIB family hydrolase 123 341 IPR006379 -
Phac11g00081 389 SUPERFAMILY HAD-like 122 380 IPR036412 -
Phac11g00081 389 Gene3D - 121 204 IPR023214 -
Phac11g00081 389 Gene3D - 220 386 IPR023214 -
Phac11g00081 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 383 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00081 Phac-Chr11 555094 561567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00081 115 377 Trehalose Biosynthesis Gene Families AT1G70290 26.429 1.97e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00081 K01087 - gmx:100819495 754.592