LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g00077	ATGGCTCGCGGAAAGGTTCAGCTGAAGAGAATTGAGAACCCTGTGCACAGACAAGTCACCTTCTGTAAGCGCCGAGCTGGGCTTCTTAAGAAGGCTAAGGAGCTCTCTGTGCTGTGCGATGCTGAAATTGGTCTTTTCATTTTCTCCGCCCATGGAAAACTCACCGAATTAGCCACCAAAGGAAGCATGCAAGGGCTGATTGAGAGGTACATGAAGTTCACAAGAGGGACTCACCCTGAAGCACCACCCCAACCACTTCTTCTGGATGCAAAAGAGGAATCTAACGTGCTGAAACAAGAAATCCAAAAACTGCAAAGGAGTATCAGGACTTCGACCATAGATGAACTACAAGTGCTAGAGAAGAATTTGGAAACTTGGATATATCATATTCGCTCAATGAAGACGAACATCATGTTACAAGAAATTGAAGCATTGAAAGACAAGGAGGGAACACTTACAGCGGCAAATAAATATCTCCATGCTAAGATTGTGGAGAATTCTGCAATTCATAACTTGGTTCAATTTGCTACAGATGCTTCATACCCACTGATTATACAAGATGGGAGTTTTCAACTCTATTAA	582	0.4296	MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLTELATKGSMQGLIERYMKFTRGTHPEAPPQPLLLDAKEESNVLKQEIQKLQRSIRTSTIDELQVLEKNLETWIYHIRSMKTNIMLQEIEALKDKEGTLTAANKYLHAKIVENSAIHNLVQFATDASYPLIIQDGSFQLY*	194

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Phac11g00077	193	Coils	Coil	87	107	-	-
Phac11g00077	193	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
Phac11g00077	193	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
Phac11g00077	193	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
Phac11g00077	193	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	3	139	-	-
Phac11g00077	193	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Phac11g00077	193	Pfam	K-box region	91	163	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
Phac11g00077	193	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	56	IPR002100	GO:0003677\|GO:0046983
Phac11g00077	193	CDD	MADS_MEF2_like	2	78	IPR033896	GO:0000977\|GO:0045944
Phac11g00077	193	SUPERFAMILY	SRF-like	1	74	IPR036879	GO:0003677\|GO:0046983

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac11g00077	Phac-Chr11	537560	544395	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g00077	1	192	MADS-box Gene Family	AT1G71692	55.450	6.72e-65	197

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Phac11g00077		K-box	5.9e-14	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g00077	-		-	gmx:100783345	310.842

Showing 1 to 1 of 1 entries