Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00074 ATGGATACTTTCACTCATGTTCCCCCCGGTTTTAGGTTCCATCCAACGGATGAAGAACTTGTTGATTACTACCTTCGGAAGAAAATGGCTTCAAGGAGGATTGACTTGGATGTCATAAAAGATGTTGACCTCTACAAAATAGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAACGGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCAATCTATTCAAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTACAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCATGAATATCGCCTTGAAACAGATGAAAATGGCACTCCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACGATGCGTAAAGTGAGTGAACAGGATTCTCCCGGTTGGTATGATGATCAAGTATCTTTCATTCAAGACATGGACTCACCCAACAACACCTCTCAATCTAACTTGGTCTACCAGCTTCCCTATCCTTGCAAGAAAGAGCTAGATTTGCCCTATCAGGTCCCTCGCGACCACTTCCTCCAGCTTCCACTTCTAGAGACCCCAAAACTGCTTCAATCTGCTTCAGCCATAACTCCTAATCCTATGTCACCATATCTTCTAGATCATGTGAACCACTCCACTGCTCTGCTTCCCTCATTACTCATACAAGAAGAACAGGCAACTTATGGCAGCAACAACTCCAATGAACCAACACTGGATCAAGTAACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCACAACTCAGTCAAGATGCATCCAAAGTCAATACCTACACAAACTCCACAGCCAATATCTTTCACAGCACAGACAATGGCAATTGCAATGTACAGTTCAGACATTTGGAGAAACAAGAGATAGTGATGCCTCAAGAAAATGCCTCAACATCAAACTCCAGCTGCCCAATTGCATTGTGGAAATAG 1059 0.4249 MDTFTHVPPGFRFHPTDEELVDYYLRKKMASRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEQDSPGWYDDQVSFIQDMDSPNNTSQSNLVYQLPYPCKKELDLPYQVPRDHFLQLPLLETPKLLQSASAITPNPMSPYLLDHVNHSTALLPSLLIQEEQATYGSNNSNEPTLDQVTDWRVLDKFVASQLSQDASKVNTYTNSTANIFHSTDNGNCNVQFRHLEKQEIVMPQENASTSNSSCPIALWK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00074 352 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Phac11g00074 352 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Phac11g00074 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 278 - -
Phac11g00074 352 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Phac11g00074 352 FunFam NAC domain-containing protein 16 160 - -
Phac11g00074 352 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00074 Phac-Chr11 528008 533336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00074 1 352 NAC Transcription Factor Family AT1G12260 55.647 1.02e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g00074 NAM 7.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00074 - - gmx:100809525 604.749