LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g00064	ATGTCGTCCTACCCTCCGCCACCGTATTCTTCGCACAAACCCGGCAAAGACCATTCCGCGACGGCGATACCGTCGTCGCCTTCCAGCAGAGCTAAACTCCGGAAGATCCCGCCCATTCCGATTCGACGGAGTAAGTTAGGCAATGAGGAGCAGGAAGAAGAGGAAGATGACGAACGCTCTGATTCTTCTTGCATCTTGCTCGCGTCCTCTTTAGGGCTGAATAACATTCGAACACGTTCTTCCTCTTCGCCTCTTCGCTATTCCTCCTCCGTTGGCGCTCCTTCCTTCATCACACAGAATGCTATCGCTATCAATGACGCCGGATTTAGATCCAGATCTAATTCTCATCCAAAAAGAGACCTAGGGGGGATAATTCATTTGAATCAATCCAAATCGCTCAAAGCACATTCGCAGCTCATTCCTGTGCTAGAGGGTCATCATGCAGCTTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATTCTGCGACTTACTAGTGGACGCAAAAAGAGAAACCCTGATATCAAAAGCTTTTCCCATGAGCTCAACTCCAAGGGAGTTAAACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACTTGGAGGAAGTAATGTCGGCGATTAGAGCTAAGTTTGAAAAATTTAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGTATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAAGTTGGAGGATCTGTTGGTTATTGCTCAACAATGTGCAAAGATGTCTCCTACCCAGTTTTGGATCAAATGCGAATCTATTGTTCAAAATCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGATTAGTGCAATTTCAGAAGGAAAGCGGATTTGAACAAGACCACATTCTGGGTCTTCACCAACTCAGCGACCTGGGGGTCTATCCTGAGCAAATTTTGAAGGCTGCACAGCAGAATTCAAGTATTCCACTCGCTGGACACGAGACGGCTGAGAAACAGTTAAAAATGTCACATAGTAAAGAGAAAGAAAAACGGAAAACAAGAAAGAGTAAAGCTGACCAACAAGTAAGTGTTGCGATTGACAACCCGGAGGTTGCTCCGGTCAAGAGTGTTGAATCAACTTCTGGCAGCTATAGGATGTCTTCTTGGAAAAAGTTTCCGTCTGCTGCTGAGAGAAAGCGAAAAGATCAAGATGCTGTAGATACCCCATCCAAAGGTGAAATGGACCACTTGCTAGTCAAAGATGAAAATGCTGAAAATTTGGATACTTCCTCTTGTCATCCTGAACATTCACAATCATCATCAAGAACGCGAAAGGTTTCTTGGGGATTCTGGGGAGACCAGCAAAATCTTACATACGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAACGAGCGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTAGAATCATGGACACCAAAAAGCACACCGAAAAGCACTGATACTCCTGGAGAAAGCTTTGACCTTGCCGCTTCAAATGTGCTTGAAGAGTTCAGCGATTTATCTCTAGAGGGAAATAACACGAGTTCTAGATGCTCTGAAGACATGCTCGACTCTACTACGGAGCCTGACAATACTTTTGTCATGGACGATCTGAACTTTTCACCCAGAATATCATGCGAAGCACGCATCTTCGTAAAACCTGATCATGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAAGTGGAAATGTTACTAAGTGGACGGAGAACACTGTCTGAACTTGAAAGTTGTGACCAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAGCAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAACCTTTTGCAGGAGAAATATATAGCTCTTTGCGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGCGTAGCTGATGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGGACCACTATTGCGGACTTTAAAATAATAAAACCCATAAGTAGGGGTGCATTTGGGCGAGTTTTTCTTACCCGAAAAAGAGTAACTGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATACTTATATCTGTTCGAAATCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTCTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCAATGTTGAGAAATCTAGGTTGCTTAGATGAAAATATGGCTCGAGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGCCATATTAAGTTGACAGATTTCGGGCTCTCTAAGGTTGGTCTTATTAACAGCACAGATGATTTATCAGCGCCATCATTTTCGGCCATCCTAGAAGACGATGAACCAAAACCTACACATTCTTTCAAACGGGAAGAGCGTCAAAGACAATCAGTGGTTGGCACTCCGGATTACTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTGGGTGTCATACTGTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCTGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCTGATGAGATGAGCTTTGAAGCATATGATTTGATAAATAAATTATTAAACGAAAATCCAGTCCAAAGATTAGGCGCAACAGGAGCTACAGAAGTTAAACGCCACGCCTTCTTCAAAGATATTAATTGGGATACACTAGCAAGGCAGAAGGCTATGTTTATTCCATCGGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACATATGGAATCCTGAGGACGAACATTGTCTCGGAGTTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGCAGCGATTTGCTAGATGAAGATGGTGACGAGTGTGGTAGTTTAGCAGAGTTCGGTGGTCCAGCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCTTCTATCAATTACGATTTGGTGATCAAGAACTCCAGGGAATCAACTCAATGA	3504	0.4264	MSSYPPPPYSSHKPGKDHSATAIPSSPSSRAKLRKIPPIPIRRSKLGNEEQEEEEDDERSDSSCILLASSLGLNNIRTRSSSSPLRYSSSVGAPSFITQNAIAINDAGFRSRSNSHPKRDLGGIIHLNQSKSLKAHSQLIPVLEGHHAAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVKPFPIWKHRAFGHLEEVMSAIRAKFEKFKEEVDSDLGGFAGDLVGILEKNLVCDREWREKLEDLLVIAQQCAKMSPTQFWIKCESIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGFEQDHILGLHQLSDLGVYPEQILKAAQQNSSIPLAGHETAEKQLKMSHSKEKEKRKTRKSKADQQVSVAIDNPEVAPVKSVESTSGSYRMSSWKKFPSAAERKRKDQDAVDTPSKGEMDHLLVKDENAENLDTSSCHPEHSQSSSRTRKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFDLAASNVLEEFSDLSLEGNNTSSRCSEDMLDSTTEPDNTFVMDDLNFSPRISCEARIFVKPDHGTKVSSAGSLTPRSPLVTPRTTQVEMLLSGRRTLSELESCDQISKLVEIARAVANVSNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIENLLQEKYIALCGQIEDEKVDSSTSVADEESSVEDDTVRSLRASPINACSKDRTTIADFKIIKPISRGAFGRVFLTRKRVTGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDENMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSAILEDDEPKPTHSFKREERQRQSVVGTPDYLAPEILLGMGHGVTADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPDEMSFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCLGVSDFDEITETCSSGSGSDLLDEDGDECGSLAEFGGPALEVQYSFSNFSFKNLSQLASINYDLVIKNSRESTQ*	1168

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac11g00064	1167	MobiDBLite	consensus disorder prediction	1	63	-	-
	Phac11g00064	1167	Pfam	Protein kinase domain	768	1053	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac11g00064	1167	FunFam	probable serine/threonine protein kinase IREH1	765	855	-	-
	Phac11g00064	1167	Gene3D	Phosphorylase Kinase; domain 1	766	1080	-	-
	Phac11g00064	1167	SUPERFAMILY	Protein kinase-like (PK-like)	765	1083	IPR011009	-
	Phac11g00064	1167	FunFam	Probable serine/threonine protein kinase IREH1	851	1071	-	-
	Phac11g00064	1167	MobiDBLite	consensus disorder prediction	356	386	-	-
	Phac11g00064	1167	CDD	STKc_MAST_like	773	1058	-	-
	Phac11g00064	1167	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	886	898	IPR008271	GO:0004672\|GO:0006468
	Phac11g00064	1167	ProSiteProfiles	AGC-kinase C-terminal domain profile.	1054	1154	IPR000961	GO:0004674\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac11g00064	Phac-Chr11	469009	480427	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g00064	33	1167	AGC Kinase Gene Family	AT5G62310	62.543	0.0	1415

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_MAST	Phac11g00064		Pkinase	5.6e-64	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g00064	-		-	gmx:100817975	1946.01

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac11g00064	11	469009	480427	Phac11g00064	11	469009	480427	ECH

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