Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00040 ATGGCAGCTTTACTCATTGATCGCTCCTTCTTCTGTCACCTCTTCCTTTTCCTTTTTTGTCTTCCACCCATAAACACTCTCTCCACTGTTTCCATTTCTCAAACCTCCAATTCAAACCAAACATTTATTTGCGTCTTGCAACATCCAAATCAACAAGGACAATCAAATCTCAACTGCACCACCTTTCCCCAGGCTCAGACTCAGGCTATTACGCTTGATGTGAATCCTAATGTCACCTACTCTCAGATTGTGGGCGGCAACGGGTTTGTGTGTGCGTTGGGGCCATCGTCTTCTTCCATCTCCATCATGGGCTGTTGGAGATTCTCTGCCAATGCTACTAATGTTCCCTATAAGCGCATCTACAGTGGACCCCTTCTCCAAGATATTGAGAGTAGCCACTCCCACGTTTGCGGTCTTGTAAATAGAGCAAATAATGAGAGTAGCCTGAAGATTGAGTGTTGGCAATGGCATGAGTTCAATTCAAGCAGTGGGAGTGTGAGGAACATGTCAATGTCAAGCATTGCAGTGGGAGAGAATTTTTTGTGTGGCTTGTCACCAAGGGGGGATGTTAATTGCACAGGAACGGGGAGGGTCAATAGTAGTAGAGTTGTTGTTGATGTCCCTGCGCCTGGTGGGAATTACACTTTTCTTGCAGCCGGGTTTAGGCATGCCTGTGTGATCTCCATTGATGGTGGTTTGGTTTGTTGGGGAGACATGGAGGGTGAGAAACCCCAAGGGAGGTTCGTTTCTTTGGCGTTGGGAGAGAACCGCAGCTGTGCACTCGGGCATGACAGAAGAGTTGTCTGTTGGGGGTCCAATGATTTCATCATGCCGCACAACTTGGAAGACACTTTTTTTGAGTCAATTGTTGCAAAGCAAAGTGTTTTCTGTGGAGTTGTGTCCTCCAATTATTCCTTGCTCTGTTGGGGTTCTCCATTTTTTGAGTCAGACAGCAAGGTGTTTGAAGATGTCCTCCCAGGACCTTGTAGGAACAAGTGTCCGTGTGGGCCCTTGTCCAACTCTGCCAAACTATGTCAGTCTCCAGAAGTCATTTGCCAACCCTGTTCCCCTCAGGTGGTTCAATCTTCACCTCCATCACCATCTCCATTGCAGCCATCACCTCCATCACCATCTCCATTGCAGCCGCCACCATCAAACCACACTGGTTGGAGTAGCCAAATGGTTGCATTCCTGGTGGTTGGATGTGTGGGCTGCAGTTCCCTGTTGCTAGTCATGGCTTTCTTCCTTTACAGGTACTGCAACTCCAAACGAAGAGGAAGCCGTGTCCATGATTCTGGCCGGTTGGATGGGTCATCTCACTCTCAACCACACCCTCAAGCTGAAGCAGGATCTCGAGTTCTTCAGAAGCGCCTGAGTCACGTTATCAGCATTGGAAATGGGAGCCCTTTTGAGGAGTTTTCCCTGGAGACACTGCTTCAAGTCACCAACAATTTCTGTGAGGACAAGAGAGTTGGGATTGGCAGCTTCGGTTCGGTGTATCATGCCACTTTGGAGGACGGGAAGCAGATTGCTATAAAGAGAGCCGAAGCCTCATCCTCCACCTACACTGTCTTGGGTGCCCAAGTGGACAAAGACAATGCTTTCATGAATGAGCTTGAATCTCTCTCCAGACTCCACCACAAGAACCTGGTCCGGTTGGTGGGGTTCTATGAAGACACTAAAGAACGCATTTTGGTGTACGAGTACATGGACAATGGGAGCCTCAGTGACCATCTCCACAAGCTCCAAACTTCAGCTCTGATGTCATGGGCAGTGCGCATCAAGGTGGCTCTGGATGCTGCCAGAGGCATAGAGTACTTGCACCAATACGCCACTCCTCCAATCATTCACCGTGACATAAAGTCTGCCAACATACTGTTGGATGCCAAGTGGACTGCCAAAGTCTCTGATTTTGGACTCTCCCTAATGGGACCTGACCCTGAAGATGAGGAGGCCCACCTTTCACTTCTGGCAGCTGGCACTGTTGGCTACATGGACCCTGAATACTACAGACTTCAGCATTTGACCCCCAAGAGTGATGTCTATAGCTTTGGCGTGGTTTTGCTAGAGTTGCTCTCCGGCTACAAGGCCATCCATAAAAACGAGGATGGGGTGCCAAGAAATGTGGTTGATTTTGTGGTGCCATTCATTGTTCAAGATGAGATTCACAGAGTGTTGGACAAAAGAGTGCCCCCTCCCACGCCCTTTGAGATAGAGGCTGTGGCGTTTGTGGGTTATTTGGCAGCAGATTGTGTGAGGCTGGAAGGTCGAGATAGACCAACCATGTCTCAAGTTGTAAATAACTTGGAAAGAGCATTGGCTGCATGTTTAGCCCAACCAATACTCTCTAGGTCCACCACTCACTCTTCCGAAATTGTTACTTTAACAACTCAAATTGAAATGCACTAA 2409 0.484 MAALLIDRSFFCHLFLFLFCLPPINTLSTVSISQTSNSNQTFICVLQHPNQQGQSNLNCTTFPQAQTQAITLDVNPNVTYSQIVGGNGFVCALGPSSSSISIMGCWRFSANATNVPYKRIYSGPLLQDIESSHSHVCGLVNRANNESSLKIECWQWHEFNSSSGSVRNMSMSSIAVGENFLCGLSPRGDVNCTGTGRVNSSRVVVDVPAPGGNYTFLAAGFRHACVISIDGGLVCWGDMEGEKPQGRFVSLALGENRSCALGHDRRVVCWGSNDFIMPHNLEDTFFESIVAKQSVFCGVVSSNYSLLCWGSPFFESDSKVFEDVLPGPCRNKCPCGPLSNSAKLCQSPEVICQPCSPQVVQSSPPSPSPLQPSPPSPSPLQPPPSNHTGWSSQMVAFLVVGCVGCSSLLLVMAFFLYRYCNSKRRGSRVHDSGRLDGSSHSQPHPQAEAGSRVLQKRLSHVISIGNGSPFEEFSLETLLQVTNNFCEDKRVGIGSFGSVYHATLEDGKQIAIKRAEASSSTYTVLGAQVDKDNAFMNELESLSRLHHKNLVRLVGFYEDTKERILVYEYMDNGSLSDHLHKLQTSALMSWAVRIKVALDAARGIEYLHQYATPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPDPEDEEAHLSLLAAGTVGYMDPEYYRLQHLTPKSDVYSFGVVLLELLSGYKAIHKNEDGVPRNVVDFVVPFIVQDEIHRVLDKRVPPPTPFEIEAVAFVGYLAADCVRLEGRDRPTMSQVVNNLERALAACLAQPILSRSTTHSSEIVTLTTQIEMH* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00040 802 SUPERFAMILY RCC1/BLIP-II 71 313 IPR009091 -
Phac11g00040 802 MobiDBLite consensus disorder prediction 426 451 - -
Phac11g00040 802 Gene3D - 64 325 IPR009091 -
Phac11g00040 802 ProSiteProfiles Protein kinase domain profile. 485 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00040 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Phac11g00040 802 Pfam Protein kinase domain 487 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00040 802 FunFam Serine/threonine-protein kinase-like protein CCR4 570 788 - -
Phac11g00040 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 68 783 IPR044815 GO:0004674
Phac11g00040 802 MobiDBLite consensus disorder prediction 363 386 - -
Phac11g00040 802 CDD STKc_IRAK 491 771 - -
Phac11g00040 802 Gene3D Phosphorylase Kinase; domain 1 447 569 - -
Phac11g00040 802 SMART serkin_6 485 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00040 802 MobiDBLite consensus disorder prediction 363 384 - -
Phac11g00040 802 Gene3D Transferase(Phosphotransferase) domain 1 570 781 - -
Phac11g00040 802 SUPERFAMILY Protein kinase-like (PK-like) 462 769 IPR011009 -
Phac11g00040 802 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00040 Phac-Chr11 346827 349941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00040 26 788 Receptor kinase-like Gene Family AT5G47850 48.590 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phac11g00040 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00040 - - pvu:PHAVU_011G003100g 1499.18