Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac11g00034 | ATGGCCCAGCAGTCATCTAGGCTCCAGCGTTTGCTTACTCTCCTGGACACTGGGTCAACCCAAGCTACAAGGTTGACCGCTGCTCGTCAGATAGGGGACATTGCAAAATCACACCCTCAAGACTTGACCAGTCTTCTCAAGAAGGTTTCTCAATATCTCCGCAGTAAAAATTGGGATACACGAGTTGCAGCTGCTCATGCAATTGGATCAATCGCCGAGAATGTTAAGCACATAAGTTTGACTGAACTTTTTGCTTCTGTTATATCACAAATGAGTGAGAATGGGATATCTTGTAGCATTGAGGATCTTTGTGCATGGCCGTATTTACAATCAAAACTTACAGGAAGCGCATTTAGAAGCTTTGATATGAACAAGGTGCTTGAATTTGGTGCCTTATTAGCATCAGGGGGTCAGGAATATGATATTGGAAATGATAATATAAAGAACCCGAAGGAGCGATTGGTTCGACAGAAGCAAAGTCTTCGCCGTCGTTTAGGTTTGGATGTCTGTGAACAATTTATGGATATCAGTGATGTCATAAGAGACGAAGATCTTATGGTGTCGAAATCAGACTCACATCTGAATGGGATTGATGGTAGAGTTTTTACTTCTTGTTCTGCTCATAACATCCAGAAAATGGTGGTAAACATGGTTCCTAGTGTCAAATCAAAGTGGCCAAGCGCAAGAGAATTGAATCTTTTAAAGCGTAAAGCGAAAATAAACTCAAAGGACCAAACAAAAACCTGGTGTGAAGATGGAGGTACAGAGGCATCAGGTGCTCAAAGTTTGACTTCAAAAGGCACATGTCCTGATTCACTGAATTACAGTAAGGTATTCATGGATGTTAATCACGACGATGACGGCTTCGAGCATGATGGGGATGGGCAATGGCCTTTCCACACTTTTGTTGAGCAACTTATTATAGATATGTTTGATTCTGTTTGGGAGATACGACATGGTAGCGTAATGGCACTGAGAGAGATTTTAGCACATCAAGGTTCTTCTGCTGGAGTATTTAAACCTGACTCACACATGGGTGGGACCCTGTTTATTGAATTAGAAGACAAAAGTATGCCAAGCACATTGAAGAGAGAGAGGGAAATTGATTTAAATATGCACGTTTCAGCTGATGAGTTTGATTCAAACCTGAAGAGGCCAAAACTTGAAGATGTATCATCATCAACCTTTATGGATAGTGTGATGACTTGCAACAATGAAGGTGATATTAAAATCAGCATTACTTCTGAAACCCATGGATGCAATTTAACATTGGATTATGGGAATGGGCAATTTAATGGTAATTCCAATGACATGGATCTGGAGTCTCAACCTGATGGCTCACATGATGCATGCAAAGAGTCTGCTAGTATAGCAGAACAGAAGGTTCATTTTGATGACAATAAGATGCCCCCTGGAAATCTTATTGCGCTGAGAAATCTTCCTCAGAACTGCGAGCTGATGAACTCTGTTAAAGTGGCTAGAAGTTCCTGGCTTCAAAACTGTGAATTTCTTCAAGATTGTGTGATACGCTTTTTGTGCGTGTTGTCACTAGATCGCTTTGGAGATTATGTATCTGATCAGGTTGTTGCTCCAGTGCGTGAAACCTGTGCACAGGCTTTAGGTGCTGCATTTAAGTATATGCATCCTGCACTAGTAAATGAAACATTGAACATATTGTTGGGAATGCAGTGTAGGCCAGAATGGGAGATTCGTCATGGCAGTCTTCTTGGTATAAAATATTTGGTTGCTGTACGGCAGGAGATGCTTTCTGATTTGCTTGGACGAGTTCTTCCTGCTTGTAAATCTGGGTTGGAGGACCCAGATGATGATGTCCGGGCAGTTGCTGCTGATGCTTTAATACCTGCTGCATCTGCAATTGTTTCCTTGCAGGGTCAAACATTGCATTCCATTGTGATGCTTTTATGGGATATATTGCTTGACTTGGATGATTTAAGTCCGTCCACCAGCAGTGTAATGAATCTGCTGGCAGAAATCTATTCTCAAGAAGAAATGGCGCCAAATATGTATGAAGTTTTTAGATTGGGAGACAAGGAAATGGAAAATGGAGGAGGTGGTTGTGGTGATGACGATGGAGAAGAAAATCCTTATGTGCTTTCAACATTGGCACAACGTTTGTGGCCCTTTATGAGGCACAGTATCACATCTGTTCGTTATTCTGCAATACGGACTTTGGAGAGGTTACTTGAAGCTGGATATAAAAGAAGCATGTCTGAGTTGTCTGGTGCTTCATTCTGGCCCTCTTCTATATTTGGAGATACCCTTAGAATCGTATTCCAGAATCTGCTATTAGAAACAAATGAGGATATTTTGCAATGTTCTGAGAGAGTTTGGAGTCTCCTTGTTCAGTGTTCTATGGAGGACTTGGAGATGGCTGCAAGTTCTTATGGGGCTTCTTGGATAGAACTTGCATCTACACCATTTGGATCAGCATTAGATGCATCAAAGATGTACTGGCCTGTTGCCTTTCCACGAAAAAGTCAAATTAGAGCAGCTGCTAAAATGAGAGCTGCAAAAATTGAAAATGAATATGGTGTGGAATTTAGTCTTGATTCTATTAAAGGAACTATTCCACACGATAGAAATGGAGATGTTCCCATGAATTCTGTCAAGATGGTCGTTGGTGCTGATGTGGACACGTCTGTTACTCATACCCGAGTAGTTACAGCAACTGCTTTGGGATATTTTGCTTCTAAGCTGCCAGCGAGTTCTTTAAAATATGTGATTGATCCACTGTGGAGCTCCCTAACCTCTTTATCTGGTGTCCAACGCCAGGTTGCATCTATGGTACTTATTTCTTGGTTCAAGGAGATTAAGATCAGGAATTTGTCCAAAAACCTTGATGGTATCCCTGGTGCCCTCAAAGGTTGGTTGCTGGACTTATTAGCATGTTCTGACCCAGCATTCCCGACAAAAGATTCACTTCTTCCTTATGCTGAGCTTTCCAGAACTTATGCAAAGATGCGCAGTGAGGCTGGTCAATTACTAAATGTAGTCAAGTCTTCTGGTATGTTTGATGAGTTATTGACAGCAACACAAATTGAGTTGGATCGCTTGAGTGTGGATGATGCCATTGGTTTTGCTTCAAAAATTCCAGCTTTGTGTAATGATAGTTCTGCAAATGAATCCTTGGCAAAGAACATCATGGATGATATTGAGTCCTCCAAACAAAGACTCTTGACAACTTCTGGATATTTAAAATGTGTTCAGAGCAACTTGCATGTTACAGTCACATCTGCAGTTGCAGCTGCAGTTGTCTGGATGTCTGAATTTCCTACACGACTTACGCCAATCATTTTGCCTTTGATGGCTTCAATCAGACGAGAGCAGGAGGAAATACTCCAAATGAAGTCTGCTGAGGCCCTTGCTGAGCTAATGTATCACTGTGTTGCACGTAAACCTTGCCCCAATGATAAATTAATAAAAAATATATGTAGTTTAACTTGCATGGATCCCTCTGAGACCCCTCAAGCCAAATCCCTTTGTACCATTGAGAGTATCGATGACCAAGGTCTTCTGTCTTTTAGAACTCCTGTGAGCAAACAGAAGTCAAAGGTCCATGTGCTGGCTGGTGAAGATCGTTCAAAGGTGGAGGGATTTTTAAGTAGACGAGGATCTGAGCTATCATTGAGGCTTCTATGTGAAAAGTTTGGTGCGTCATTATTTGACAAGCTTCCTAAGCTGTGGGATTGCCTTACTGAAGTTCTTAAACCTGTACCTGTCATCGAGGAAAAGCAAGCTAATGTGTCTATTGAGTCTGTTAGTGATCCTCAAACCTTGATTAACAATATCCAGGTGGTGCGCTCTGTTGCTCCTGTGTTAATCAAGGAGTTGAAGCCAAAACTGTTGACACTTCTTCCATGCATCTTCAAATGTGTTCAGCATTCTCATGTTGCTGTTAGATTAGCTGCTTCGCGCTGCATCACTTCCCTGGCACAGTCAATGACTGTGAAAGTTATGGGAGCTGTGATTGAAAAGGCTATCCCTATGTTGGAAGATTCGTCATCTGTTTATGCTCGACAAGGAGCAGGCATGTTGATTAGTTTTCTAGTTCAGGGGCTGGGTGTAGAGTTGGTACCTTATGCTCCTCTGTTGGTGGTTCCCCTTCTAAGGTGTATGAGTGATTGTGATCAATCTGTCAGACAGAGCGTGACTCATAGTTTTGCTGCTCTTGTTCCTTTACTTCCTTTGGCTCGGGGCCTTCCTCAACCTATTGGACTAGGGGAAGGTGTATCCAGAAATGCAGAAGACTTGCAGTTTTTAGAGCAACTGCTTGACAACTCTCATATTGAAGATTACAACTTGTGCACTGAATTGAAAGTAACATTGAGGAGGTATCAGCAGGAAGGCATAAATTGGTTAGCTTTTTTGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGACTTGGAAAGACACTTCAAGCATCAGCAATTGTGGCCTCTGATATAGCTGAGCATCGGACTACAATTGGGAATGAGGATCTTCCGGCATCTTTAATTATCTGCCCATCAACTCTAGTTGGGCACTGGGCCTTTGAGATAGAGAAGTATATTGATGTTTCTGTTATATCTAGTCTTCAGTATGTTGGTTCTGCTCAGGAAAGAATGCTTCTTCGAGATCATTTTTGTAAGCATAATGTCATTATAACATCATATGATGTTGTGCGTAAAGATGTTGATTTTCTGGGACAGCTGCTGTGGAATTACTGCATTTTAGATGAAGGGCACATAATAAAAAATGCCAAGTCTAAAGTTACACTTGCTGTAAAACAGTTGAAAGCCCAGCACCGCTTGATATTGAGTGGGACACCTATACAGAATAATATAATGGACTTGTGGTCCCTCTTTGATTTTCTGATGCCAGGCTTTCTTGGAACCGACAGACAGTTCCAAGCAGCATATGGAAAACCACTTTTAGCTGCAAGAGATCCAAAATGCTCTGCTAAGGATGCTGAAGCAGGAGTACTTGCTATGGAGGCATTGCATAAGCAGGTGATGCCTTTCCTCCTTCGTAGAACAAAGGATGAAGTCTTGTCTGATCTGCCAGAGAAAATAATCCAAGACAGATACTGTGATTTGAGCCCTGTACAATATAAACTTTACGAACAGTTTTCTGGTTCTCGTGTAAAACAAGAAATGTCATCTATTGTAACAACAACGAATGAGTCTGCTGCACCAGAAGGAAGTGGCACTTCTACTAAAGCGTCTTCACATGTTTTCCAGGCACTCCAATATTTGCTAAAACTCTGTAGTCATCCATTGCTTGTCACTGGTGAGAAGATTCCAGATTCACTCTCTTCCATCCTCTTAGAACTGTTTCCTGCTGGCTCTGATGTTGTTTCAGAACTTCACAAACTCCATCACTCCCCAAAATTAGTTGCTCTTCATGAGATTCTAGAAGAATGTGGAATTGGAGTTGATAATTCAGGTTCTGAGGGTACAGTTAACGTTGGGCAGCATAGGGTCTTGATATTCGCTCAGCATAAGGCTTTCCTGGATATAATTGAAAGAGACTTGTTTCAGACACACATGAAAAGTGTCACATATTTGCGGTTGGATGGGTCAGTTGCATCAGAAAAGCGTTTTGAAATTGTCAAAGCTTTCAATTCAGACCCTACCATTGATGTCTTACTGCTTACAACACATGTTGGTGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTTGTCTTTGTGGAGCATGACTGGAATCCAATGCGAGACCATCAGGCTATGGATAGAGCACACAGGTTAGGTCAGAAAAAAGTAGTTAATGTCCATCGACTAATAATGCGTGGTACTTTGGAAGAGAAAGTTATGAGTCTACAAAGATTCAAAGTGTCCGTGGCTAATGCTGTCATTAATGCTGAAAATGCTAGTATGAAAACAATGAATACAGATCAGTTGCTTGACTTATTTGCATCAGCAGAAACCTCCAAAAAGGGTGTTAATGCTGTGAAGAGTTCGGAGAACAATTCTGATGGAGACGCCAAATTAGTAGGCAGTGGGAAGAGATTGAAATCGATACTTGGCGGATTGGAGGAACTATGGGACCAATCACAGTATACAGAGGAGTACAATCTGAGTCAATTTTTAGCGAGGCTTAATGGCTAA | 6141 | 0.4161 | MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLTSLLKKVSQYLRSKNWDTRVAAAHAIGSIAENVKHISLTELFASVISQMSENGISCSIEDLCAWPYLQSKLTGSAFRSFDMNKVLEFGALLASGGQEYDIGNDNIKNPKERLVRQKQSLRRRLGLDVCEQFMDISDVIRDEDLMVSKSDSHLNGIDGRVFTSCSAHNIQKMVVNMVPSVKSKWPSARELNLLKRKAKINSKDQTKTWCEDGGTEASGAQSLTSKGTCPDSLNYSKVFMDVNHDDDGFEHDGDGQWPFHTFVEQLIIDMFDSVWEIRHGSVMALREILAHQGSSAGVFKPDSHMGGTLFIELEDKSMPSTLKREREIDLNMHVSADEFDSNLKRPKLEDVSSSTFMDSVMTCNNEGDIKISITSETHGCNLTLDYGNGQFNGNSNDMDLESQPDGSHDACKESASIAEQKVHFDDNKMPPGNLIALRNLPQNCELMNSVKVARSSWLQNCEFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALVNETLNILLGMQCRPEWEIRHGSLLGIKYLVAVRQEMLSDLLGRVLPACKSGLEDPDDDVRAVAADALIPAASAIVSLQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEEMAPNMYEVFRLGDKEMENGGGGCGDDDGEENPYVLSTLAQRLWPFMRHSITSVRYSAIRTLERLLEAGYKRSMSELSGASFWPSSIFGDTLRIVFQNLLLETNEDILQCSERVWSLLVQCSMEDLEMAASSYGASWIELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENEYGVEFSLDSIKGTIPHDRNGDVPMNSVKMVVGADVDTSVTHTRVVTATALGYFASKLPASSLKYVIDPLWSSLTSLSGVQRQVASMVLISWFKEIKIRNLSKNLDGIPGALKGWLLDLLACSDPAFPTKDSLLPYAELSRTYAKMRSEAGQLLNVVKSSGMFDELLTATQIELDRLSVDDAIGFASKIPALCNDSSANESLAKNIMDDIESSKQRLLTTSGYLKCVQSNLHVTVTSAVAAAVVWMSEFPTRLTPIILPLMASIRREQEEILQMKSAEALAELMYHCVARKPCPNDKLIKNICSLTCMDPSETPQAKSLCTIESIDDQGLLSFRTPVSKQKSKVHVLAGEDRSKVEGFLSRRGSELSLRLLCEKFGASLFDKLPKLWDCLTEVLKPVPVIEEKQANVSIESVSDPQTLINNIQVVRSVAPVLIKELKPKLLTLLPCIFKCVQHSHVAVRLAASRCITSLAQSMTVKVMGAVIEKAIPMLEDSSSVYARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGVSRNAEDLQFLEQLLDNSHIEDYNLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTTIGNEDLPASLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQERMLLRDHFCKHNVIITSYDVVRKDVDFLGQLLWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTDRQFQAAYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQYKLYEQFSGSRVKQEMSSIVTTTNESAAPEGSGTSTKASSHVFQALQYLLKLCSHPLLVTGEKIPDSLSSILLELFPAGSDVVSELHKLHHSPKLVALHEILEECGIGVDNSGSEGTVNVGQHRVLIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVASEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMKTMNTDQLLDLFASAETSKKGVNAVKSSENNSDGDAKLVGSGKRLKSILGGLEELWDQSQYTEEYNLSQFLARLNG* | 2047 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac11g00034 | 2046 | FunFam | TATA-binding protein-associated factor BTAF1 | 508 | 688 | - | - | |
Phac11g00034 | 2046 | CDD | SF2_C_SNF | 1797 | 1939 | - | - | |
Phac11g00034 | 2046 | SMART | ultradead3 | 1445 | 1639 | IPR014001 | - | |
Phac11g00034 | 2046 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1434 | 1681 | IPR027417 | - | |
Phac11g00034 | 2046 | FunFam | TATA-binding protein-associated factor 172 | 1691 | 2009 | - | - | |
Phac11g00034 | 2046 | FunFam | TATA-binding protein-associated factor BTAF1 | 1 | 96 | - | - | |
Phac11g00034 | 2046 | PANTHER | TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 | 4 | 2045 | IPR044972 | GO:0003677|GO:0016887|GO:0017025 | |
Phac11g00034 | 2046 | FunFam | TATA-binding protein-associated factor BTAF1 | 1201 | 1407 | - | - | |
Phac11g00034 | 2046 | SUPERFAMILY | ARM repeat | 6 | 1488 | IPR016024 | - | |
Phac11g00034 | 2046 | Pfam | SNF2-related domain | 1467 | 1764 | IPR000330 | GO:0005524|GO:0140658 | |
Phac11g00034 | 2046 | FunFam | B-TFIID TATA-box-binding protein-associated factor 1 | 1419 | 1680 | - | - | |
Phac11g00034 | 2046 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1818 | 1974 | IPR001650 | - | |
Phac11g00034 | 2046 | Gene3D | - | 501 | 675 | IPR011989 | - | |
Phac11g00034 | 2046 | Gene3D | - | 1201 | 1407 | IPR011989 | - | |
Phac11g00034 | 2046 | Pfam | Helicase conserved C-terminal domain | 1826 | 1928 | IPR001650 | - | |
Phac11g00034 | 2046 | Gene3D | - | 1421 | 1680 | IPR038718 | - | |
Phac11g00034 | 2046 | SMART | helicmild6 | 1842 | 1928 | IPR001650 | - | |
Phac11g00034 | 2046 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1461 | 1631 | IPR014001 | - | |
Phac11g00034 | 2046 | Gene3D | - | 4 | 93 | IPR011989 | - | |
Phac11g00034 | 2046 | Gene3D | - | 1691 | 2009 | IPR027417 | - | |
Phac11g00034 | 2046 | Pfam | Domain of unknown function (DUF3535) | 783 | 1237 | IPR022707 | - | |
Phac11g00034 | 2046 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1682 | 1984 | IPR027417 | - | |
Phac11g00034 | 2046 | CDD | DEXHc_Mot1 | 1449 | 1681 | IPR044078 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac11g00034 | Phac-Chr11 | 321209 | 341489 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac11g00034 | 1444 | 1983 | RAD5 or RAD16-like Gene Family | AT1G02670 | 26.034 | 3.90e-43 | 167 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SNF2 | Phac11g00034 | DUF3535 | 2.8e-103 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac11g00034 | K15192 | - | gmx:100777977 | 3630.49 |