Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00015 ATGAGAATGAGGGTTTTGCAGTTGTGTTTTTCCATGGCTTCCGCGAGTACATGCAGAGCTCCTCTGCAGGTAGAATTGGGGAAGTTCTGGATTTTGAGAAACAGGAGAGGCGGCAGTAATTTGCAGGTGCAGAGTTCTCGCGGACCCCCGAGAGCCCCTCCTGGAGTTGACACCAGAATCCACTGGGACAACGAGGATGAAGGGTGGATTGGAGGCGGAGACAGAGATAAAAACACCAAATCCAGCAACATGTTCGCTGATGATGACTTCTCAGATTTGCTCCTCACCTCTTCTTTAAGCTCTCATTACGAATTCTTAGGAGTATCACCCGATGCGGATTTAGAAGAAATCAAAGTTGCTTATAGGAAACTATCGAAGGAGTATCATCCCGATACAACTTCCCTCCCTCTGAAAAGTGCGTCGGAAAAATTCATGAAACTGAGAGAGGTTTACAACGTTCTGAGCGACGAAGAGAGTCGAAAATTTTATGATTGGAGCCTTGCTCAAGAGGCTGCAAGCCGGCACGCAGAGAAGATGAAAATGAAATTAGAGGATCCTCGAGCGCAACAACTCAGGAACTGGGAACCTGTTCCTGACATGGTCGACCGCCTCGGTGGAAGGAATATGAAGCTTAGCAATCAGGCAGTCTCTGCCATCACTATTGATGTTTTTATCATTATTTTTTCCATTTTCTGTATCACTTACGTAGTCTTCTTTAGAGAACCATATTACTACTAG 738 0.4566 MRMRVLQLCFSMASASTCRAPLQVELGKFWILRNRRGGSNLQVQSSRGPPRAPPGVDTRIHWDNEDEGWIGGGDRDKNTKSSNMFADDDFSDLLLTSSLSSHYEFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKSASEKFMKLREVYNVLSDEESRKFYDWSLAQEAASRHAEKMKMKLEDPRAQQLRNWEPVPDMVDRLGGRNMKLSNQAVSAITIDVFIIIFSIFCITYVVFFREPYYY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00015 245 SMART dnaj_3 100 159 IPR001623 -
Phac11g00015 245 CDD DnaJ 102 156 IPR001623 -
Phac11g00015 245 Pfam DnaJ domain 102 164 IPR001623 -
Phac11g00015 245 Gene3D DnaJ domain 93 187 IPR036869 -
Phac11g00015 245 FunFam DnaJ homolog subfamily C member 4 91 188 - -
Phac11g00015 245 ProSitePatterns Nt-dnaJ domain signature. 144 163 IPR018253 -
Phac11g00015 245 ProSiteProfiles dnaJ domain profile. 101 167 IPR001623 -
Phac11g00015 245 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 40 243 IPR044618 -
Phac11g00015 245 PRINTS DnaJ domain signature 103 121 IPR001623 -
Phac11g00015 245 PRINTS DnaJ domain signature 121 136 IPR001623 -
Phac11g00015 245 PRINTS DnaJ domain signature 139 159 IPR001623 -
Phac11g00015 245 MobiDBLite consensus disorder prediction 40 60 - -
Phac11g00015 245 SUPERFAMILY Chaperone J-domain 96 168 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00015 Phac-Chr11 170707 171964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00015 102 169 C2H2 Transcription Factor Family AT1G74250 37.500 5.48e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00015 K23051 - gmx:100819309 327.405