Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00013 ATGGCTTTCTGGGGAGTGGAAGTGAAACCAGGAAAGCCTTTTACTCATAAATATGAGGACTCCAAAGGACGCCTCCATATTTCAATGGCCACTCTGGGGTTGGGCACTGCTACAACAAAAAGCACACTGCAGTGCAATGTCGGAAACAGGAGTCCTGTATACCTATGCTCTCTCTACCCTGGAAACTCAGAGTCATTGCAATTAAACTTAGAGCTCGAAGAAGTTGATCAAGTTCTTCTCTCTGTAATTGGCCCTCGGAGCATTCATCTCTGCGGCTACTATCTTGCCACTGCCCGCAACGCCAATCTTGTTGATGACTCTGAATCATATGGGGAGGATATTGCTGATACAGAAACAGAGAGATCTGATTACAGTGACGAAGAGGATTATGAGGATAGTTTTATTGATGATGACATTGTTCCAGAGGCTTTCTCACCATCTCCTATTTCCAAAGAAGAGGAAGCTTCTCATGACACCAGACCAAAAATTAGGAAAGGCAGTCTTCGACGGCTTAGGAAGAGGTACCAAGTTGAGTCGGATGATGATGGCTGTTGTGGAGAAAAGATAATTGGCAATGACAGAATGCATGCCCAAATCCAGGAAACTGACAATGAAGATAGCCTACCTATTTCATCTCTTTACAAGAATAAAGCCTCTGGAAGGGTGGTGGAAGAGGAAATGGATGTTAGTGTTGTCATAGGAGCAGGTGCTGCCAGCAACAAGAATGGAGAAGATGGTGGAAATAGTACTTTTGAAACAAATCTAGAGGCTGGGCATGTCCTTGTAGATAGTCAGACACATAGGGAAGCTGTACCTTCAAAGCACTTGGTAGATCCTTGCACATCTCTGGATGTTGGGGATATTAAAAATTCAAAAAAGAAAAAGAAGAGAAAGGAAAAAGAGACAAAGAGCTCCTGTAATGGCCATTCTATCAAACTAGATAATGTTATAGATGAGCTAAAAAAGGAAGAGATGACCCAGGATATTGTGGCAGGAGGTAAACAACAGCAGCATGCCGATGATAAGGAAACTGAGACCACAGATAAAGTACTGTCTTCCTCTCAGGTTGATCATGGGCTGGGTGAAAAGCCAAAGAAGAAAAGGAAAGAAAGATCTAATGAGGGGATGGATTCAATTGCTACTGATGGCTATCATAACAGTCTTGTTAATCTGCCTCTAAGAAATGAACAACACACAGTTAATGAGGATGTTAAAATTTCAGGCAATGTTGCATTGCCTTCTGCTGAGACGGATCCTAAAAAGAACAGGACAAAGGGGAAAAAGAAAGAACAGGTTAACAAAAGTGACAATGGATACAATGAAAATGCCATCCAGGAGGACAAGGCCAACAGAGATGCAGCAGGGTCACAAAATGTGATTAATAATTTTTTTGAAGAAAAACAACAGCATCAGAAGCTAACTAATGAGAAGATGGTAGACAATGGTGCTTTTGACTTACCTGATGGAAATCAATCTGAGAATAGAAAAGTTAAGAAAAGGAAGAAAATGAGCAAAAGTCAGGGCAACGGGGAAGTTGTAAATTCTAATATTGCTGTATATGTTGAGCGAAGTGGTGAGACTGAGATGATGGAGGAGGATAGAAATAAGGGGGTAGATGCAAAACCTTCCCATGTTAGAACTTTGACAAACGGACTAGTTATTCAGGAACAAGAGAAGGGGATAAAAGATGGCAAAATCGCTGCTTCAGGAAAAAAGATTAGCATCTATTACACTGGTAAGTTGAAGGAAAATGGAACTATCTTTGAGTCAAATGCCGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGCGAGGTTATCGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGGAGACTCGTTATCCCACCATCACTGACGTCTGAGAGTGAAGGATACTCTGCCAAAATACCACCAAATTCATGGTTGGTTTATGACATTGAACTAGTTAAAGTTCATTGA 1977 0.4163 MAFWGVEVKPGKPFTHKYEDSKGRLHISMATLGLGTATTKSTLQCNVGNRSPVYLCSLYPGNSESLQLNLELEEVDQVLLSVIGPRSIHLCGYYLATARNANLVDDSESYGEDIADTETERSDYSDEEDYEDSFIDDDIVPEAFSPSPISKEEEASHDTRPKIRKGSLRRLRKRYQVESDDDGCCGEKIIGNDRMHAQIQETDNEDSLPISSLYKNKASGRVVEEEMDVSVVIGAGAASNKNGEDGGNSTFETNLEAGHVLVDSQTHREAVPSKHLVDPCTSLDVGDIKNSKKKKKRKEKETKSSCNGHSIKLDNVIDELKKEEMTQDIVAGGKQQQHADDKETETTDKVLSSSQVDHGLGEKPKKKRKERSNEGMDSIATDGYHNSLVNLPLRNEQHTVNEDVKISGNVALPSAETDPKKNRTKGKKKEQVNKSDNGYNENAIQEDKANRDAAGSQNVINNFFEEKQQHQKLTNEKMVDNGAFDLPDGNQSENRKVKKRKKMSKSQGNGEVVNSNIAVYVERSGETEMMEEDRNKGVDAKPSHVRTLTNGLVIQEQEKGIKDGKIAASGKKISIYYTGKLKENGTIFESNAGQAPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPSLTSESEGYSAKIPPNSWLVYDIELVKVH* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00013 658 Gene3D - 520 658 IPR046357 GO:0003755
Phac11g00013 658 MobiDBLite consensus disorder prediction 109 128 - -
Phac11g00013 658 Gene3D Nucleoplasmin core domain 1 99 - -
Phac11g00013 658 SUPERFAMILY FKBP-like 505 657 - -
Phac11g00013 658 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 388 - -
Phac11g00013 658 MobiDBLite consensus disorder prediction 480 510 - -
Phac11g00013 658 MobiDBLite consensus disorder prediction 144 163 - -
Phac11g00013 658 MobiDBLite consensus disorder prediction 328 383 - -
Phac11g00013 658 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 566 655 IPR001179 GO:0003755
Phac11g00013 658 MobiDBLite consensus disorder prediction 418 435 - -
Phac11g00013 658 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 570 658 IPR001179 GO:0003755
Phac11g00013 658 MobiDBLite consensus disorder prediction 359 376 - -
Phac11g00013 658 MobiDBLite consensus disorder prediction 282 310 - -
Phac11g00013 658 MobiDBLite consensus disorder prediction 399 453 - -
Phac11g00013 658 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00013 Phac-Chr11 152237 159264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00013 569 655 Calmodulin-binding Proteins AT5G48570 43.182 1.13e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00013 K14826 - gmx:100798135 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00013 11 152237 159264 Phac11g00013 11 152237 159264 ECH