Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02230 ATGCACCACAACCTTAACCTTGCAAGGTTGTGGCTTGCTTTGCTTGCGGTCTCAACCACCTCAGTTCATTGCAAAACCTCCTCCCAAGATGTTGCAGCCCTTAATGTGATGTATTCCAGCTTGAATTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGAGGTGATCCTTGTGGTGAATCCTGGAAAGGAATCAAATGCTCAGGCTCTTCTGTCACAGAAATAAATTTGTCAGACATGGGACTGTCTGGATCAACGGGCTACCAGTTGTCCAGCTTATCATCAGTAACCTACTTTGATTTGAGCAACAACAACCTCAAGGGTGATATACCGTATCAGCTTCCTCCAAAAGCTCGTCATATAGATCTTTCGAACAATGGCTTCACGGGAAGTATACCTTTTTCCTTTTCTCAGATGGATGAGCTCACCCAGCTAAATCTTGGACATAATCAGCTCCAAAACCAGTTGGGAGATATGTTTGAAAAGCTCACTAAACTCAAACAACTGGACGTATCATTCAATTCTCTATCAGGAAACCTACCTCAGAGTCTGAAATCGCTCAAAAACCTCAAGAAGTTGCACCTTCAAAACAACCAATTCACTGGTTCAATAAATGTTCTTGCCAACCTTCCACTTGAAGATTTGCATGTCGAAAACAACAAATTTACTGGTTGGGTTCCTGAGGAGTTGAAGAGTATAAATGAATTGCAAACTGGAGGAAACTCATGGTCAAAGGGACAAGCACCTCCTCCTCCTCCTGGTACTCCCCCTATCAAACATCCCAAGAAAAAGAAAGAAAAATCCGTTATTAGTGGAGTAGCTATAGCAGGCATAATTTTTGGCTTACTGGCAGTAATTATAATTATTGTTGCTCTTTGTAAAAGAAAGTCATCGAAACCTTCTTCACAATTTACCGATGAAGAGAGGCGTAGCCATCATAGACCTCGTACACCCCTTGCATCTCAGGAGTTATCAAAAGATTTGGGTGCTGATGTCAAAGAATTCAAAGGATTTAGCTCATTGGATTCCACTTCAATTGACGTAAAGGCCTTGCAAAAATCTCCATCAATTGGTGTCAGGTCCTCTGCCTCCGATTGTGTGCAATCCTTTAATGACAATGAGTTTGCAAATCGGCTAAATTCCAGAAGAAGTGCATCAGTCCGTGTTACTACTTTTTCGCTGGCAGATCTGTACTCGGCTACTGCTAGTTTTGGTTCAGGTCGACTTCTTGGTGAAGGATCCATAGGATGTGTTTATCGAGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAAATCAACCCTTCGCTTTTCCAAGGTGGTGCCTCTGAGGAATTCTCCCAGATTGTTTCAAAACTCAGCAAACTTCACCACCCAAATATTGTTGAGCTTGTTGGTTATTGTTCGGAACAGGAGCACATGTTAATTTATGATTATTTTAGAAATGGCTCTCTCCATGGCTTTTTACACTTGTCAGATGACTTCAGCAAACCACTCACTTGGAACACAAGAATCAGAATTGCATTGGGAACAGCTCGGGCTATTGAGTACCTGCATGAAACTTGTTCTCCTCCTTTATTGCACAAGAATATTAAGTCCTCGAATATTTTGCTTGACACGGACCTGAATCCTCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCGGAATGCACAAAACCTTCAGCCTTCACACTGAAGAGTGATGTATACAGTTTTGGGGTAGTGATGCTGGAACTTCTCACAGGTCGAATGGCTTTCGACAGTTCAAAGCCAAAAGCAGAACAATGTCTGGTTCGTTGGGCAACTCCACTTCTTCACGACATTAACGCCGTAGAGAAAATGGTGGACCCTGCCTTGCGGGGGCTCTACCCTCCTAAGTCCCTCTTCCGATTTGCTGATGTCATCGCTCTCTCTGTTCAGTCTGAACCTGAATTTCGGCCACCTGTGTCAGAGTTAGTTCAGGCTTTAATGCGATTGGTTCAACGTTCAAGTATGACACTGAGGGAGGATTTTGATTGA 2064 0.4317 MHHNLNLARLWLALLAVSTTSVHCKTSSQDVAALNVMYSSLNSPSKLSGWKSSGGDPCGESWKGIKCSGSSVTEINLSDMGLSGSTGYQLSSLSSVTYFDLSNNNLKGDIPYQLPPKARHIDLSNNGFTGSIPFSFSQMDELTQLNLGHNQLQNQLGDMFEKLTKLKQLDVSFNSLSGNLPQSLKSLKNLKKLHLQNNQFTGSINVLANLPLEDLHVENNKFTGWVPEELKSINELQTGGNSWSKGQAPPPPPGTPPIKHPKKKKEKSVISGVAIAGIIFGLLAVIIIIVALCKRKSSKPSSQFTDEERRSHHRPRTPLASQELSKDLGADVKEFKGFSSLDSTSIDVKALQKSPSIGVRSSASDCVQSFNDNEFANRLNSRRSASVRVTTFSLADLYSATASFGSGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLFQGGASEEFSQIVSKLSKLHHPNIVELVGYCSEQEHMLIYDYFRNGSLHGFLHLSDDFSKPLTWNTRIRIALGTARAIEYLHETCSPPLLHKNIKSSNILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAFTLKSDVYSFGVVMLELLTGRMAFDSSKPKAEQCLVRWATPLLHDINAVEKMVDPALRGLYPPKSLFRFADVIALSVQSEPEFRPPVSELVQALMRLVQRSSMTLREDFD* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02230 687 Coils Coil 149 169 - -
Phac10g02230 687 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 369 480 - -
Phac10g02230 687 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 671 - -
Phac10g02230 687 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Phac10g02230 687 SUPERFAMILY Protein kinase-like (PK-like) 384 671 IPR011009 -
Phac10g02230 687 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Phac10g02230 687 ProSiteProfiles Protein kinase domain profile. 404 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02230 687 MobiDBLite consensus disorder prediction 300 323 - -
Phac10g02230 687 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 685 - -
Phac10g02230 687 SUPERFAMILY L domain-like 25 238 - -
Phac10g02230 687 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Phac10g02230 687 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Phac10g02230 687 Gene3D Ribonuclease Inhibitor 24 259 IPR032675 -
Phac10g02230 687 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Phac10g02230 687 Pfam Protein tyrosine and serine/threonine kinase 407 671 IPR001245 GO:0004672|GO:0006468
Phac10g02230 687 MobiDBLite consensus disorder prediction 237 264 - -
Phac10g02230 687 Gene3D Phosphorylase Kinase; domain 1 363 480 - -
Phac10g02230 687 MobiDBLite consensus disorder prediction 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02230 Phac-Chr10 43119898 43125095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02230 7 686 Strubbelig Receptor Gene Family AT1G78980 60.000 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac10g02230 PK_Tyr_Ser-Thr 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02230 - - pvu:PHAVU_010G165200g 1049.65