Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02206 ATGAGTTGGCTCAGATTCACAGTACTCATCATCATCACTCTTCACTCCTCAGAAAACATCAACACTTTTCTTTGGTTGCATGTATATATGATGGATTCAAAGAAGTGTAACAAGATCCGAGAGGTGGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAAGCTGCTACTTCTTCTGCTTCCAGCAGTGCAGACATGGTTCCAAAAGGCTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAAATTCATCATTCCCACCCATTACCTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCCCAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCATGTATCAGTCTTCCAGAAAATACTCAAGGCTGTGGAGGACAACAAACAACCCTTGCTACATCACTCTGGCTTCGATGGAGACAAAGACAGCACTACTTCTTACGTATCAGATTGTGAAGTTACACCCTCTCATCACCCTCAAACTTGTACATAG 510 0.4353 MSWLRFTVLIIITLHSSENINTFLWLHVYMMDSKKCNKIREVVRLQQILKKWKKAATSSASSSADMVPKGFLAVCVGKELKKFIIPTHYLRHQAFEMLLQEAQEEFGFQQEGVLKIPCHVSVFQKILKAVEDNKQPLLHHSGFDGDKDSTTSYVSDCEVTPSHHPQTCT* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02206 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 126 IPR003676 GO:0009733
Phac10g02206 169 Pfam Auxin responsive protein 44 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02206 Phac-Chr10 43000223 43001766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02206 31 165 Calmodulin-binding Proteins AT2G24400 45.614 6.70e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02206 K14488 - vra:106773901 176.792