Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02181 ATGAGGCCGATGCAACTCCCACCGCCTTCCGCCTCCGCCTCCGCCGCCGCTCCGGGACCTGCCAACAGCAAGGATCAGCGTCCCCAGCGCCGCCGCAAGGACCTCACGCTGCCGCTGCCGCAGCGCGACACCAATTTGGCGGTGCCGCTTCCTCTTCCGCCGTCCACGGCCCCGGCCGCGGCCAGCGGCGGAGCCGGCCAGCAGCAGCAGCAGCAGCAGGTGATCCCGTTCGCGGAGCTGGAGAGAATGAACCGCATCGGGAGCGGGAGCGGGGGGACGGTGTACAAGGTGGTCCACCGAACGACCGGGCGCGTGTACGCGCTGAAGGTGATATACGGCCACCACGAGGAGTCGGTGCGGCGGCAGATCCACCGCGAAATCCAGATCCTGCGCGACGTGGACGATCCGAACGTGGTGAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTGCTGGAGTTCATGGACGGGGGATCTCTGGAGGGGAAACACATCCCGCAGGAGCAGCAGCTGGCAGATCTGTCGAGGCAGATTCTGCGGGGGCTGGCGTATCTGCACCGGCGGCACATCGTGCACAGGGACATCAAGCCCTCTAATCTGCTCATAAACTCGCGCAAGCAGGTGAAGATTGCGGACTTCGGTGTGGGTCGGATTCTGAACCAGACCATGGATCCGTGCAATTCTTCGGTGGGAACGATCGCCTACATGAGTCCCGAGAGGATCAACACGGACATAAACGACGGGCAATACGACGCCTACGCCGGCGACATATGGAGCTTTGGGGTGAGCATATTGGAGTTCTACATGGGCAGGTTTCCCTTCGCTGTGGGGAGGCAAGGCGATTGGGCCAGCCTCATGTGTGCCATCTGTATGTCTCAGCCACCGGAGGCTCCTCCTTCTGCCTCCCTCCACTTCAGGGATTTCATCTCCCGGTGCCTCCAGCGCGACCCCTCTCGCCGCTTGTCTGCCTCAAGGCTGCTCGAACACCCCTTCATTGCCCCTCCCCACTCCAACCACAATCAGCTTCCTCCCAATCTCCACCAGCTCCTCCCCCCTCCTCCTCCCCGGCCTCTTCCCTCCTAG 1092 0.6291 MRPMQLPPPSASASAAAPGPANSKDQRPQRRRKDLTLPLPQRDTNLAVPLPLPPSTAPAAASGGAGQQQQQQQVIPFAELERMNRIGSGSGGTVYKVVHRTTGRVYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPQEQQLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASLHFRDFISRCLQRDPSRRLSASRLLEHPFIAPPHSNHNQLPPNLHQLLPPPPPRPLPS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02181 363 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 20 337 - -
Phac10g02181 363 Gene3D Transferase(Phosphotransferase) domain 1 164 351 - -
Phac10g02181 363 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Phac10g02181 363 SMART serkin_6 80 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02181 363 Pfam Protein kinase domain 81 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02181 363 Gene3D Phosphorylase Kinase; domain 1 60 159 - -
Phac10g02181 363 SUPERFAMILY Protein kinase-like (PK-like) 80 356 IPR011009 -
Phac10g02181 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Phac10g02181 363 FunFam Mitogen-activated protein kinase 2 61 159 - -
Phac10g02181 363 MobiDBLite consensus disorder prediction 1 72 - -
Phac10g02181 363 FunFam Mitogen-activated protein kinase 2 160 346 - -
Phac10g02181 363 CDD PKc_MAPKK_plant_like 78 335 - -
Phac10g02181 363 ProSiteProfiles Protein kinase domain profile. 80 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02181 Phac-Chr10 42882574 42885719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02181 1 351 MAP Kinase Kinase Gene Family AT1G51660 68.421 1.75e-170 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phac10g02181 Pkinase 2.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02181 K13413 - gmx:100818488 577.4