Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02163 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCAGGGTTCATGAAGATGTTCCCAAGGAGGTAGAAAGCAAGCTTTTCTCGTTGGGAATGCCCAAGTTTAACGTGGAAGAAGAGTGTACTAATGAGTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGGTGAAATGCTCTCGGTGGTGTGTGAGAACTACAACACTTTGCGAAGCCATTTGATGGAATATACGAGGAAAAATGGTGAAAAAGAGACCAGCCCAACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTATTTGTGTTATGGGGACTAACAATGGAAACTCCGAGAGCAGCTCCACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATCAAACCAAAAATTTCGAGAGTTTATGTCAGGACCGAAGCTTCTGACACTACCCTTATTGTTAAAGATGGATACCAGTGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTGGCTACTTATGAAGGAGAGCACAATCATCACCAAGCTTCTTCCCAAATGGAGGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGCTTCAGTGCCTTGTTCCGCATCTTTCAGCGCTGCCACTCCAACACTTGTTACCCTTGACTTGACTAAATCTAAGGGTAGCAACAACGATTCCAAGAGCACAAGAACTAAAGTAGATTCACCTAAAGTAAAGCAGGTTTTGGTGGAACAGATGGCAACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATTATTAA 942 0.4363 MDCSSWINTSLDLNINPRRVHEDVPKEVESKLFSLGMPKFNVEEECTNELEEELKRVTAENKKLGEMLSVVCENYNTLRSHLMEYTRKNGEKETSPTSKKRKSESSNNNSICVMGTNNGNSESSSTDEESCKKPREETIKPKISRVYVRTEASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHHQASSQMEATSGSGRSVTLASVPCSASFSAATPTLVTLDLTKSKGSNNDSKSTRTKVDSPKVKQVLVEQMATSLTTDPNFRAALVAAISGRLLHNY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02163 313 MobiDBLite consensus disorder prediction 85 100 - -
Phac10g02163 313 Gene3D WRKY domain 143 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g02163 313 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g02163 313 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g02163 313 MobiDBLite consensus disorder prediction 85 137 - -
Phac10g02163 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 309 IPR044810 GO:0003700
Phac10g02163 313 Coils Coil 47 67 - -
Phac10g02163 313 MobiDBLite consensus disorder prediction 101 125 - -
Phac10g02163 313 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g02163 313 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g02163 313 FunFam WRKY transcription factor 40 144 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02163 Phac-Chr10 42796366 42798918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02163 4 311 WRKY Transcription Factor Family AT1G80840 52.978 1.32e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac10g02163 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02163 - - gmx:100170678 524.242