Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02160 ATGGATCCGCAGAATGAACACGCCCAAGGTAACCCCAGAAACATAATCTTCAACAAATACGAGATGGGGCGGGTGCTGGGGCAGGGGAACTTCGCCAAGGTCTACCACGGCAGAAACCTCATCACCAACGACAACGTGGCCATGAAGGTCATAAAGAAGGAGAAGCTGAAGAAGGAGCGACTCGTGAAGCAGATCAAACGCGAGGTTTCGGTGATGAAACTGGTGCGGCATCCCCACATCGTGGAACTGAAGGAAGTGATGGCCACCAAGGGAAAGATCTTCCTCGTCATGGAATACGTCAGGGGCGGAGAACTCTTCACCAAAGTCAACAAAGGAAAACTCTCCGAAGACCTCGCCAGAAAGTACTTCCAGCAACTCATCAGCGCCGTCGACCACTGCCACAGCCGCGGCGTCACCCACCGCGATCTCAAGCCGGAGAATCTCCTCCTGGACCAGAACGAGGACCTCAAAGTCTCCGACTTCGGACTCTCGGCGCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCGTGACCCCGTGTGGGACCCCTGCTTACGTGGCGCCGGAGGTTCTGAAGAAAAAGGGTTACGACGGTTCAAAGGCCGATATATGGTCCTGTGGGGTGATTCTCTACGCCTTGCTCTGCGGCTATTTACCCTTCCAAGGTGAGAACGTTATAAGAATCTATCGAAAAGCGTTTCGAGCTGAATATGAATTACCCGAATGGGTTTCGCCGCCGGCCAAAAATCTGATTTCGAATCTCCTCGTTGCTGATCCTGCAAAGAGGTATTCCATTCCCGATATAATGAACCACCCTTGGTTTCAATTAGGGTTCATGAGGCCCATTGCGTTTTCAATCGAGCACTCCGAGGTAGAACAGAGCTTCGATTTCGACGACGATGAGGTTCCAACGAGGAAACCCACGAGACCGTTTTACAACGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTCAGGAGTTTGTTCGAGACGAGGAAGCGGTCGCCCTCGATGTTTATCTGTAAGTTTTCGGCTTCGGCGGTGATGGCGAAGGTGGAGGCTGCTGCGAAGAAGCTGGATTTTAGGGTGACGGGGAAGAAGGAGTTTGCGGTGAGGATGCAGGGGGCGGAGGAGGGGAGGAAGGGGAAGTTGGCGATGACGGTGGAGGTTTTTGAGGTGGCGGCGGAGGTGGCGGTGGTGGAGTTTTCTAAGTCCGCCGGAGACACTTTGGAGTATATTAATTTGTGTGAAGAGCAAATGCGACCATCTCTGAAAGACGTTGTTTGGAGCTGGCACGGTGATAGCAATCACTTCTGCAACAATTAG 1332 0.533 MDPQNEHAQGNPRNIIFNKYEMGRVLGQGNFAKVYHGRNLITNDNVAMKVIKKEKLKKERLVKQIKREVSVMKLVRHPHIVELKEVMATKGKIFLVMEYVRGGELFTKVNKGKLSEDLARKYFQQLISAVDHCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVIRIYRKAFRAEYELPEWVSPPAKNLISNLLVADPAKRYSIPDIMNHPWFQLGFMRPIAFSIEHSEVEQSFDFDDDEVPTRKPTRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAVMAKVEAAAKKLDFRVTGKKEFAVRMQGAEEGRKGKLAMTVEVFEVAAEVAVVEFSKSAGDTLEYINLCEEQMRPSLKDVVWSWHGDSNHFCNN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02160 443 Gene3D Transferase(Phosphotransferase) domain 1 13 310 - -
Phac10g02160 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Phac10g02160 443 Coils Coil 48 68 - -
Phac10g02160 443 FunFam Non-specific serine/threonine protein kinase 12 99 - -
Phac10g02160 443 ProSiteProfiles NAF domain profile. 307 332 IPR018451 GO:0007165
Phac10g02160 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 426 - -
Phac10g02160 443 Pfam NAF domain 311 366 IPR004041 GO:0007165
Phac10g02160 443 Gene3D Kinase associated domain 1, KA1 311 432 - -
Phac10g02160 443 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Phac10g02160 443 CDD CIPK_C 313 427 - -
Phac10g02160 443 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02160 443 SUPERFAMILY Protein kinase-like (PK-like) 16 322 IPR011009 -
Phac10g02160 443 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02160 443 FunFam Non-specific serine/threonine protein kinase 13 309 - -
Phac10g02160 443 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02160 443 FunFam Non-specific serine/threonine protein kinase 308 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02160 Phac-Chr10 42779403 42782327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02160 13 439 CBL-interacting serine-threonine protein kinases AT5G10930 62.069 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac10g02160 Pkinase 1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02160 - - vun:114167214 766.148