Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02148 ATGGACAGCGAGGAAGTCCCTTCAGCACCTTCAACACCTGCAACACCAGGAACTCCAGCGGTCCCTCTGTTTGGTGGCCTCAGGTTTGAGAAACCTAATGTTGTTAGGAAATCATCCTTCCTCAGAAGCTGCAAATGCTTCAGTGTTGAAGAATGGACCTTGGAAGATGGAGCCATGCCTAGAGCCTCTTGCTCTTTACCAGCCCCTCCCATCCCTCTAGCAAAAAAGGTTGGAGCTGAGTTTATAGGCACGTTCATTCTGATGTTTGCCGCTATAGGCACTGCTATTGTGAACCAAAAGACTCATGGCTCAGAAACTCTAATTGGATGTGCTGCAGCAAATGGACTTGCTGTCATGATCATCATTTTCTCCACTGGTCACATCTCTGGGGCTCATCTCAACCCCGCTGTCACCATTTCCTTCGCTGCACTAAAGCACTTTCCTTGGAAGAATGTGCCAGTGTATATTGGTACACAAATTTTGGCATCAGTGAGTGCTGCATTTGCAGTGAAGGCGGTTTTTCATCCCTTCATGAGCGGTGGAGTGACGGTCCCTTCTGTGGGATATGGGCAAGCTTTCGCCACAGAGTTCATTGTCAGCTTTATTCTCATGTTCGTGGTCACTGCAGTAGCCACCGACACAAGAGCTGTGGGAGAGCTTGCAGGAATAGCAGTGGGAGCCACAGTTATGCTCAACATACTTATAGCCGGGCCAGCAACTGGAGGTTCTATGAACCCTGTAAGAACATTGGGTCCAGCCATTGCTGCAAACAACTACAAGGGCATATGGGTGTATCTCATTGCTCCCATATTTGGGACTCTGTGTGGGGCAGGGGCCTACACTGTGGTCAAGCTGCCCCAAGAAGAGGCTACAAAACCTCCCATTGTTGGAAGCTTCAGAAGGTGA 906 0.4934 MDSEEVPSAPSTPATPGTPAVPLFGGLRFEKPNVVRKSSFLRSCKCFSVEEWTLEDGAMPRASCSLPAPPIPLAKKVGAEFIGTFILMFAAIGTAIVNQKTHGSETLIGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQILASVSAAFAVKAVFHPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYKGIWVYLIAPIFGTLCGAGAYTVVKLPQEEATKPPIVGSFRR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02148 301 FunFam Aquaporin NIP2-1 63 294 - -
Phac10g02148 301 SUPERFAMILY Aquaporin-like 72 289 IPR023271 -
Phac10g02148 301 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac10g02148 301 Gene3D Glycerol uptake facilitator protein. 69 294 IPR023271 -
Phac10g02148 301 PANTHER AQUAPORIN NIP2-1 46 291 IPR034294 -
Phac10g02148 301 ProSitePatterns MIP family signature. 132 140 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02148 Phac-Chr10 42731467 42736531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02148 1 301 Major Intrinsic Protein MIP AT1G80760 72.876 3.89e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02148 K09874 - gmx:100798410 528.48