Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02139 ATGGCCAGACCCCAACAACGCTATCGTGGAGTCCGCCAAAGGCACTGGGGCTCTTGGGTCTCAGAAATTCGCCACCCTTTATTGAAGACTAGAATTTGGCTTGGAACCTTTGAAACGGCTGAAGATGCAGCAAGAGCATATGATGAAGCAGCAAGGCTCATGTGTGGGCCAAAAGCACGCACCAATTTCCCATACAACCCCAATGAGCCACACTCATCCTCATCCAAGCTTCTCTCTGCCACTTTAACGGCTAAGTTACACAAGTGTCACATGGCTTCGCTTTCTCTTCAAATGGCCAAGCAAAAACCACCCCAGAACAACAAAGAGCCTCAACCCTCACAAGGGTCCAATCCATTTTCCTCTGACAACATCATCGCTGGATCAAGCGCTGAAACTGGTTTCAGATGGCCAGAGAACAGACACGAGGAGTTAAGGTGGCTTGAAGGGAATTGGGTTGGCGTGGGAGGCCAAGTTGAAGTTTCACATCAACAATTCCAGCCAGTTCTTGAAGATGATCACATAGAGCAGATGATTCAGGAGTTGCTTGATTATGGATCAATTGAGCTTTGCTCTGTTGGCTCCACCTAG 588 0.4847 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNEPHSSSSKLLSATLTAKLHKCHMASLSLQMAKQKPPQNNKEPQPSQGSNPFSSDNIIAGSSAETGFRWPENRHEELRWLEGNWVGVGGQVEVSHQQFQPVLEDDHIEQMIQELLDYGSIELCSVGST* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02139 195 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 MobiDBLite consensus disorder prediction 98 124 - -
Phac10g02139 195 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Phac10g02139 195 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Phac10g02139 195 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Phac10g02139 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 120 - -
Phac10g02139 195 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02139 Phac-Chr10 42684947 42686158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02139 1 192 AP2-EREBP Transcription Factor Family AT5G25190 62.500 3.49e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac10g02139 AP2 8.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02139 - - gmx:100777851 352.443