Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02131 ATGACCATGAACCACGAAATCTACTTACACGCGCTCACCACCACCACCGCTAACTTTTTCCTCGCCAAATCCGAAACGGCGCCGTCTCAGCCGCTCGACTCATCGCACAAGCTACGCTACGAAACGGCGCTCGAAGGGATAGCCGCGGTTGTTGGAGAGCACGTGCTCTTCGGAACCACGTCGTCGTTGCATGTTCCCGACACGCCCAAGAAAACGGCGGCCGTGTCGGCGAACAAGAGTTACCGAGGAGTGAGGAAGAGACCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCGGGCGGTGCCGCCACTGGCTGGGGACCTTCGACACGGCGGAGGAAGCGGCGCGTGCGTACGACGCGGCGGCGAGGCGGCTGAGAGGCGCGAAGGCGAGGACCAACTTCAAGATACCCTCTGTGCTGCCGCTTTCTCCGTCGTCGGAAGGTGGTGCCGTGAAGCCGAAAGCGGCGCGCAATAACGCGAGGAAGTGTTCCTCTGTGGAACAGTTGTTCAGTGGCGTGCCTCAAACTCGAAGAAATGAGGGTGGTGGTGAGAATGGGAAGGTGGAGGTGGATTTAAAGCTGGGTGTTGCGAACACTAGAATAGTTATTTAG 618 0.5955 MTMNHEIYLHALTTTTANFFLAKSETAPSQPLDSSHKLRYETALEGIAAVVGEHVLFGTTSSLHVPDTPKKTAAVSANKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFKIPSVLPLSPSSEGGAVKPKAARNNARKCSSVEQLFSGVPQTRRNEGGGENGKVEVDLKLGVANTRIVI* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02131 205 Gene3D AP2/ERF domain 79 138 IPR036955 GO:0003700|GO:0006355
Phac10g02131 205 Coils Coil 113 133 - -
Phac10g02131 205 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Phac10g02131 205 FunFam Ethylene-responsive transcription factor 2 79 138 - -
Phac10g02131 205 Pfam AP2 domain 80 129 IPR001471 GO:0003700|GO:0006355
Phac10g02131 205 CDD AP2 79 138 IPR001471 GO:0003700|GO:0006355
Phac10g02131 205 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Phac10g02131 205 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Phac10g02131 205 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 68 160 - -
Phac10g02131 205 SUPERFAMILY DNA-binding domain 80 137 IPR016177 GO:0003677
Phac10g02131 205 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02131 Phac-Chr10 42632690 42633442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02131 45 143 AP2-EREBP Transcription Factor Family AT1G80580 66.038 2.23e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac10g02131 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02131 - - gmx:102667667 279.641