Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02129 ATGGGGGAGCCATGCCACAAATATTGGTTCTCTGATATGGAAATACAGGATTTTGATTTCTTTAACCAAAGCCATCACAAGATTGAGTCATTGAATAATGAGTTCCTCTTCTCATCACAGCATGCACAAGAGAAACCTGCCACAGCCACCACTTCTCCAACTGCGTACATTCTATCTTTCAATGACTCCACTGTGGTTGCAGCTACCTGCCAAACCTACGGTGGAAAACAGCCGTACCAAGAGGAAGTTGTTGTGGGGAGTGGTGGCGCGTGTCTTCCCTCAAAAGGGGTCTCAGAAAAACATTACATTGAACCTAAGCCCAACCCAGCAACAAGAAAAGGAAGAAGTTCTGCCGAGACACTAGACCATATAATGACTGAGAGAAAAAGGAGACGGGAACTCACAGAAAGATTCATTGCACTTTCAGCCACCATACCTGGTTTGAAGAAGATTGACAAGGCCACTATACTTTGCGAAGCCATAACTTATGTGAAACGACTTAAAGAACGAGTAAGAGAGCTAGAAGAACAATGTAAGAGGACAAGGGTAGAGTCAGTGTCATTTGTTCATCAGAGATCCAATATTGGTAGTGACAAAGGCACAACCTCTGGTGCAATGAAATCTGATGAATGCTATAAAACCAGTGAAGCACTCCCTACAGTGGAAGCAAGAGTGTTTAAAAAAGATCTACTCATTCGGATTCACTGCAAGATACAAAATGGCATTTTGATCAAAATTTTGGACCATCTTAACACTCTTGATCTCTACACAACCAGCAACAGTGTAATGCCATTTGGAAGTTCAACTCTTGACATTAGCATTGTTGCTCAGATGGGTGACAAATTCAACGCAACAATGAATGATCTAGTGAAAAACCTGAGACTGGTTCTCTTGCAGTCATCTGAAGTTCAACAATGA 918 0.4205 MGEPCHKYWFSDMEIQDFDFFNQSHHKIESLNNEFLFSSQHAQEKPATATTSPTAYILSFNDSTVVAATCQTYGGKQPYQEEVVVGSGGACLPSKGVSEKHYIEPKPNPATRKGRSSAETLDHIMTERKRRRELTERFIALSATIPGLKKIDKATILCEAITYVKRLKERVRELEEQCKRTRVESVSFVHQRSNIGSDKGTTSGAMKSDECYKTSEALPTVEARVFKKDLLIRIHCKIQNGILIKILDHLNTLDLYTTSNSVMPFGSSTLDISIVAQMGDKFNATMNDLVKNLRLVLLQSSEVQQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02129 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
Phac10g02129 305 Pfam Helix-loop-helix DNA-binding domain 123 167 IPR011598 GO:0046983
Phac10g02129 305 Coils Coil 164 184 - -
Phac10g02129 305 Gene3D - 111 184 IPR036638 GO:0046983
Phac10g02129 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 193 IPR036638 GO:0046983
Phac10g02129 305 SMART finulus 124 173 IPR011598 GO:0046983
Phac10g02129 305 PANTHER BHLH TRANSCRIPTION FACTOR 30 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02129 Phac-Chr10 42620439 42622966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02129 114 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.935 3.56e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g02129 HLH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02129 - - gmx:100777846 421.394