Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02127 ATGGATTTCTTCGACAACATTGACTTCGACGATTTCTTCTCCGACATCATCCTCCACCAGACGCCGCCGCCCACGCCCTTCTCCTCCGAAAGCGAAACCGATCACTCCTTTCGCGCTTCCTCCTTCCTCCCCAACGCCGCCGTTAACGCCGCCGCTTCCAAACGCTCCTCTCCCAGGACTTACATTCTCTCCTTCGATAACTCCACGGTGGTGCCCGCCACTCCCGAACCCTCCGCCCCTTCTTCACCTCTACCTGCCAAACGCACCCTCCACTCTCATAACCCCATGACCCGACCCAATCAAGGATCCAAGAGAACCCGAACCTCTTCTCAGACCATCGATCACATAATGGCCGAGAGAAGGAGGAGGCAGGAACTCACCGAGAGGTTCATAGCACTCTCAGCCACCATTCCCGGCTTGAACAAGACGGATAAGGCTTCTGTACTTCGAGCAGCGATCGATTATGTGAAACAGCTGAAAGAAAAGGTACAGGAGCTGGAGAAACAAAGCAGAAAGAGTGCAGAAGAGACAGTAATATTGGTGAATAAAACCGACCCAAATGGAAATGAAGAGATCACCAACTCCTCCACTGAAACCAACTGCAGCATCCTCCCGGAGATGGAAGCAAGAGTGTTGGGAAAGGAGGTGCTCATTGAGATCCACTGTGAGAAAGAACATGGTGTTGAGCTCAAAATATTGGACCACCTTGAAACTCTTCATCTCTGTGTCACCGGAAGCAGTGTCTTGCCATTTGGGAATTCAGCTCTCTGCATTACCATCACAGCTCAGGTATCTTATATATTATGCCTCAATCAACTTTACTTTCTTCTTCTGATAATCTTTAGCAAAATATGTTGTCTCACACAGATTATAATCCCGAAAGATGTGTTGTGTTGA 897 0.4916 MDFFDNIDFDDFFSDIILHQTPPPTPFSSESETDHSFRASSFLPNAAVNAAASKRSSPRTYILSFDNSTVVPATPEPSAPSSPLPAKRTLHSHNPMTRPNQGSKRTRTSSQTIDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLKEKVQELEKQSRKSAEETVILVNKTDPNGNEEITNSSTETNCSILPEMEARVLGKEVLIEIHCEKEHGVELKILDHLETLHLCVTGSSVLPFGNSALCITITAQVSYILCLNQLYFLLLIIFSKICCLTQIIIPKDVLC* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02127 298 Pfam Helix-loop-helix DNA-binding domain 115 160 IPR011598 GO:0046983
Phac10g02127 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 159 IPR011598 GO:0046983
Phac10g02127 298 SMART finulus 116 165 IPR011598 GO:0046983
Phac10g02127 298 PANTHER BHLH TRANSCRIPTION FACTOR 32 269 - -
Phac10g02127 298 MobiDBLite consensus disorder prediction 85 110 - -
Phac10g02127 298 MobiDBLite consensus disorder prediction 69 110 - -
Phac10g02127 298 Coils Coil 149 176 - -
Phac10g02127 298 Gene3D - 108 179 IPR036638 GO:0046983
Phac10g02127 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 179 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02127 Phac-Chr10 42611713 42613906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02127 101 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.199 1.65e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g02127 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02127 - - vun:114166804 394.815