Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02125 ATGGAGGAGGACTCGTGCCACAATAATTGGCATCTTCACATGGAAATGGATTTCTTCGACAACATTGACTTCGACGATTTCTTCTCCGACATCATCCTCCACCAGACGCCGCCGCCCACGCCCTTCTCCTCCGAAAGCGAAACCGATCACTCCTTTCGCGCTTCCTCCTTCCTCCCCAACGCCGCCGTTAACGCCGCCGCTTCCAAACGCTCCTCTCCCAGGACTTACATTCTCTCCTTCGATAACTCCACGGTGGTGCCCGCCACTCCCGAACCCTCCGCCCCTTCTTCACCTCTACCTGCCAAACGCACCCTCCACTCTCATAACCCCATGACCCGACCCAATCAAGGATCCAAGAGAACCCGAACCTCTTCTCAGACCATCGATCACATAATGGCCGAGAGAAGGAGGAGGCAGGAACTCACCGAGAGGTTCATAGCACTCTCAGCCACCATTCCCGGCTTGAACAAGACGGATAAGGCTTCTGTACTTCGAGCAGCGATCGATTATGTGAAACAGCTGAAAGAAAAGGTACAGGAGCTGGAGAAACAAAGCAGAAAGAGTGCAGAAGAGACAGTAATATTGGTGAATAAAACCGACCCAAATGGAAATGAAGAGATCACCAACTCCTCCACTGAAACCAACTGCAGCATCCTCCCGGAGATGGAAGCAAGAGTGTTGGGAAAGGAGGTGCTCATTGAGATCCACTGTGAGAAAGAACATGGTGTTGAGCTCAAAATATTGGACCACCTTGAAACTCTTCATCTCTGTGTCACCGGAAGCAGTGTCTTGCCATTTGGGAATTCAGCTCTCTGCATTACCATCACAGCTCAGGTATCTTATATATTATGCCTCAATCAACTTTACTTTCTTCTTCTGATAATCTTTAGCAAAATATGTTGTCTCACACAGATTATAATCCCGAAAGATGTGTTGTGTTGA 942 0.4904 MEEDSCHNNWHLHMEMDFFDNIDFDDFFSDIILHQTPPPTPFSSESETDHSFRASSFLPNAAVNAAASKRSSPRTYILSFDNSTVVPATPEPSAPSSPLPAKRTLHSHNPMTRPNQGSKRTRTSSQTIDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLKEKVQELEKQSRKSAEETVILVNKTDPNGNEEITNSSTETNCSILPEMEARVLGKEVLIEIHCEKEHGVELKILDHLETLHLCVTGSSVLPFGNSALCITITAQVSYILCLNQLYFLLLIIFSKICCLTQIIIPKDVLC* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02125 313 Gene3D - 123 194 IPR036638 GO:0046983
Phac10g02125 313 SMART finulus 131 180 IPR011598 GO:0046983
Phac10g02125 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 194 IPR036638 GO:0046983
Phac10g02125 313 Coils Coil 164 191 - -
Phac10g02125 313 MobiDBLite consensus disorder prediction 85 125 - -
Phac10g02125 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Phac10g02125 313 PANTHER BHLH TRANSCRIPTION FACTOR 43 284 - -
Phac10g02125 313 MobiDBLite consensus disorder prediction 100 125 - -
Phac10g02125 313 Pfam Helix-loop-helix DNA-binding domain 130 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02125 Phac-Chr10 42611713 42613906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02125 116 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.199 2.23e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g02125 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02125 - - vun:114166804 405.986