Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02121 ATGATGGAGGACTCATGGCAGAACTGGCTCTCTCATTTGGGAATGAATGAGAACTTTGGGTGCACCAGCAATGTATGCTTTGAAGAGATGGTGTGGTTGGATAATGGGCAAGGTTGTGATAGCTCCAATAATGAGGTAGCTTGCATGGGGATGAAGGAGGAACATTCAGAGTGTTGTTGCAGTAAAAGGGGTGCTGGGAAGCATGAGGAGTTGGAGGAAAAGGGAAGGGAGAAGAGAGGAACAAAAAGAACAAGAACCTCTTCTGAGATAGAATATCACATAATCTCTGAGAGAAAAAGGAGACAGGATATAGCAGAGAAATTCATAGAACTCTCAGCTACTATACCTGGCTTGAAGAAGGTATGTATCCATATAGACAAGGCCTCTATACTTGGGGAAGCCATAAAGTACATGCGACAACTTCAACAACGCATAGCAGTGTTGGAAAAAGCAAGCAACAATAACAGTGCAAAGTCGTTGATCATCACCAAATCACACCTTTGTTCTTCAACATCATGTGAACAAAACTCTAACATTGAAGTTGAAGCAAGGGAATTGGAGAATGAAGTGCTGATTAGAATCTATTGTGAGCAACAAAAGGACATCATGCTAAACCTAATTACCCTTCTAAAAGATCTTCATCTCTCAGTAACCACTAGCACTCTATTGCCATTTGGAAACTCTCTTCTCAACATTATCATTGTTGCTCAGATGAATGAGGAGTACAAGTTGAGGGTAACTGATTTGGTTAAGACATTGAAGCAGAATCTTTTCAAGTTTTATGAGGTGTAA 792 0.4053 MMEDSWQNWLSHLGMNENFGCTSNVCFEEMVWLDNGQGCDSSNNEVACMGMKEEHSECCCSKRGAGKHEELEEKGREKRGTKRTRTSSEIEYHIISERKRRQDIAEKFIELSATIPGLKKVCIHIDKASILGEAIKYMRQLQQRIAVLEKASNNNSAKSLIITKSHLCSSTSCEQNSNIEVEARELENEVLIRIYCEQQKDIMLNLITLLKDLHLSVTTSTLLPFGNSLLNIIIVAQMNEEYKLRVTDLVKTLKQNLFKFYEV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02121 263 PANTHER BHLH TRANSCRIPTION FACTOR 47 260 - -
Phac10g02121 263 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Phac10g02121 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 88 141 IPR011598 GO:0046983
Phac10g02121 263 Coils Coil 138 158 - -
Phac10g02121 263 Gene3D - 84 154 IPR036638 GO:0046983
Phac10g02121 263 SMART finulus 94 147 IPR011598 GO:0046983
Phac10g02121 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 88 150 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02121 Phac-Chr10 42600533 42605064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02121 67 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 34.951 2.46e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g02121 HLH 7.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02121 - - gmx:100778916 301.982