Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02094 ATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCGAACCGGGCAAGGCGAGGGAAAGAACAACCCACATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCTACGAACAATTTCAACTATGACAACAAGCTTGGAGAAGGATGCTTTGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCGCAAATCGTGGTGAAAAGATTGAAAGTTTGGAGCAACATAGATGAGACAGAATTTACCGTTGAACTTGAAATCTTGGCAAGAATACGACACAAGAATCTTCTCAGTTTTCGTGGCTTCTGTGCTGAAGGACAGGAACGGTTAATTGTGTATGAATATATGCATAATCTGAGTCTCCACTCTCATCTTCATGGACACCATTCATTCGAAAGCCCTCTCGATTGGAATCGTCGGATGAAAATAGCAATTGGTTCTGCTGAAGGAATTGTGTACCTTCATCACCAAGCAACACCACATATCATCCACAGGGATATTAAATCAAGCAATGTGTTGCTGGATTCTGATTTCCGGGCCAAGGTTGCTGATTTTGGGTTTGCCAAGTTGATCCCTGATGGGGCAACACATGTGATGACTACAAAAGTTAAGGGAACTCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGCTGTGATGTCTTCAGTTTTGGTGTTCTCCTTCTAGAACTCGCTAGTGGCAGAAGACCAACAGAAAAGCTTAGTTCCACAGTGAGGCAATCAATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTCGTGAAATTGCTGATCCAAGACTGAATGGTAACTATGTGGAGGCAGAGCTTAAAAGGGTTGTTTTAGTTGCACTTATGTCTGCTCAGGATCTTCCTGAGAGGAGACCAACCATGCTTGATGTGGTAGAGCTACTCAAGGGAGAGTCTAAGGACAAATTTTCTCATATAGAGAACAGTGAAATGTTCAGAAACCCTCTAGATGCAGAAACCAATGATGGAACATCAGAGACTGAAGACAGTTTCGACTATATCTCAGAAGAAAAAGAGTTAGAACGTCCATTGAGAGAGAATGCTGAACTATGA 1098 0.4253 MAFWFCCGKVSNRARRGKEQPTWRVFSLKELHSATNNFNYDNKLGEGCFGSVYWGQLWDGSQIVVKRLKVWSNIDETEFTVELEILARIRHKNLLSFRGFCAEGQERLIVYEYMHNLSLHSHLHGHHSFESPLDWNRRMKIAIGSAEGIVYLHHQATPHIIHRDIKSSNVLLDSDFRAKVADFGFAKLIPDGATHVMTTKVKGTLGYLAPEYAMLGKANESCDVFSFGVLLLELASGRRPTEKLSSTVRQSIVDWALPLVCEKKFREIADPRLNGNYVEAELKRVVLVALMSAQDLPERRPTMLDVVELLKGESKDKFSHIENSEMFRNPLDAETNDGTSETEDSFDYISEEKELERPLRENAEL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02094 365 ProSiteProfiles Protein kinase domain profile. 38 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02094 365 Pfam Protein tyrosine and serine/threonine kinase 40 247 IPR001245 GO:0004672|GO:0006468
Phac10g02094 365 SUPERFAMILY Protein kinase-like (PK-like) 20 310 IPR011009 -
Phac10g02094 365 FunFam PTI1-like tyrosine-protein kinase At3g15890 114 326 - -
Phac10g02094 365 SMART serkin_6 38 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g02094 365 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Phac10g02094 365 MobiDBLite consensus disorder prediction 350 365 - -
Phac10g02094 365 Gene3D Transferase(Phosphotransferase) domain 1 114 328 - -
Phac10g02094 365 PANTHER OS01G0750732 PROTEIN 18 329 - -
Phac10g02094 365 MobiDBLite consensus disorder prediction 326 365 - -
Phac10g02094 365 Gene3D Phosphorylase Kinase; domain 1 8 113 - -
Phac10g02094 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Phac10g02094 365 FunFam PTI1-like tyrosine-protein kinase At3g15890 10 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02094 Phac-Chr10 42415039 42418391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02094 25 306 Trihelix Transcription Factor Family AT1G68690 48.601 8.92e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Phac10g02094 PK_Tyr_Ser-Thr 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02094 - - gmx:100814204 634.795