Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g02070 | ATGGTGCAATCAAGGAAATTCAGAGGTGTGAGGCAACGCCATTGGGGTTCCTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCAGAGGAAGCAGCAAGAGCATATGATGAGGCAGCTATTTTGATGAGTGGAAGAAACGCTAAAACAAACTTCCCAGTTGGTGAAAACCAAGTGGTGAATCACTCAACTTCCTCTTCTTCATCCACCACCACCACATTGTCTGAAGTTCTGAGTGCAAAGCTCAGGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTAAGGCTTGACACTGAGAATTCCCACATAGGGGTGTGGCAGAAGAGAGCAGGCCCTCGTTCTGACTCTAACTGGATCATGATGGTTGAGTTGGAAAAAAAGAACAGAGAGGGTGATCAAGATCAATGTCCTTCTTCTGACTCTGAAGTTCCTGTTGTTGTTGTTGATCATCATGATCATCATGCCCCAGAGAAGATAAAGCCTGAGGAAGGTAATGGCTTAGATGAGGAGCAGAGAATGGCCCTGCAGATGATAGAGGAACTTCTGAATAGGAATTGA | 594 | 0.4646 | MVQSRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVGENQVVNHSTSSSSSTTTTLSEVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWIMMVELEKKNREGDQDQCPSSDSEVPVVVVDHHDHHAPEKIKPEEGNGLDEEQRMALQMIEELLNRN* | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g02070 | 197 | Gene3D | AP2/ERF domain | 5 | 64 | IPR036955 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | CDD | AP2 | 6 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | FunFam | Ethylene-responsive transcription factor 2 | 5 | 64 | - | - | |
Phac10g02070 | 197 | Pfam | AP2 domain | 6 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677 | |
Phac10g02070 | 197 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Phac10g02070 | 197 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 3 | 146 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g02070 | Phac-Chr10 | 42312511 | 42313992 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g02070 | 1 | 197 | AP2-EREBP Transcription Factor Family | AT1G15360 | 60.000 | 4.50e-77 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Phac10g02070 | AP2 | 1.1e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g02070 | - | - | gmx:100796962 | 303.523 |