Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02070 ATGGTGCAATCAAGGAAATTCAGAGGTGTGAGGCAACGCCATTGGGGTTCCTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCAGAGGAAGCAGCAAGAGCATATGATGAGGCAGCTATTTTGATGAGTGGAAGAAACGCTAAAACAAACTTCCCAGTTGGTGAAAACCAAGTGGTGAATCACTCAACTTCCTCTTCTTCATCCACCACCACCACATTGTCTGAAGTTCTGAGTGCAAAGCTCAGGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTAAGGCTTGACACTGAGAATTCCCACATAGGGGTGTGGCAGAAGAGAGCAGGCCCTCGTTCTGACTCTAACTGGATCATGATGGTTGAGTTGGAAAAAAAGAACAGAGAGGGTGATCAAGATCAATGTCCTTCTTCTGACTCTGAAGTTCCTGTTGTTGTTGTTGATCATCATGATCATCATGCCCCAGAGAAGATAAAGCCTGAGGAAGGTAATGGCTTAGATGAGGAGCAGAGAATGGCCCTGCAGATGATAGAGGAACTTCTGAATAGGAATTGA 594 0.4646 MVQSRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVGENQVVNHSTSSSSSTTTTLSEVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWIMMVELEKKNREGDQDQCPSSDSEVPVVVVDHHDHHAPEKIKPEEGNGLDEEQRMALQMIEELLNRN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02070 197 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Phac10g02070 197 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Phac10g02070 197 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Phac10g02070 197 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Phac10g02070 197 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02070 Phac-Chr10 42312511 42313992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02070 1 197 AP2-EREBP Transcription Factor Family AT1G15360 60.000 4.50e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac10g02070 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02070 - - gmx:100796962 303.523