Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02034 ATGGGGAAAGAAGATCTTGGACTTGAAATCACGGAGCTGAGATTGGGTCTACCCGATGTGGGTAACAAGAAGAATAAGAGGGTGTTCTCGGAGATTGATGAGCTTGGAGATGAAAACAGCTCCTCCGGCGGCGGCCACCGGAAAATGGAGAAGAAGAATGAGGTGGTGGGGTGGCCTCCGGTGTGCTCGTACAGGAAGAAGAAGAGTGTGAAGGAAGGTTCAAAAATGTACGTTAAGGTTAGCATGGATGGTGCTCCTTTCTTGCGGAAAATGGATCTGGCTATGCACAAGAGATACTCCGATTTAGCCTTCGCTTTGGAGAACCTCTTTGGTTGCTGTGGAATGGTGGAAGCATTGCAGAATGCGGAGAACAGTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTCGTTGGAGATGTTCCATGGGAAATGTTTGTGGAGTCATGCAAGAGACTAAGGATTATGAAGAGAGCAGATGCAAAGGGGTTTGGTTTGCAACCAAAAGGATCTTTAAAGGGATTCATAGAAAGCGTGGGAAAGTGA 555 0.4721 MGKEDLGLEITELRLGLPDVGNKKNKRVFSEIDELGDENSSSGGGHRKMEKKNEVVGWPPVCSYRKKKSVKEGSKMYVKVSMDGAPFLRKMDLAMHKRYSDLAFALENLFGCCGMVEALQNAENSEHVPIYEDKDGDWMLVGDVPWEMFVESCKRLRIMKRADAKGFGLQPKGSLKGFIESVGK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02034 184 SUPERFAMILY CAD & PB1 domains 68 160 - -
Phac10g02034 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 164 IPR003311 GO:0005634|GO:0006355
Phac10g02034 184 Pfam AUX/IAA family 46 167 IPR033389 -
Phac10g02034 184 ProSiteProfiles PB1 domain profile. 75 163 IPR000270 GO:0005515
Phac10g02034 184 Gene3D - 70 171 - -
Phac10g02034 184 FunFam Auxin-responsive protein 70 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02034 Phac-Chr10 42069872 42074573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02034 50 182 B3 DNA Binding Superfamily AT4G23980 30.827 2.12e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Phac10g02034 AUX_IAA 2.3e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02034 K14484 - gmx:547784 301.982