Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02018 ATGAGTGTGGTGGGTTTTGATTTCGGTAACGAGAGCTGCATTGTTGCAGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTTAATGACGAGTCGAAACGTGAAACGCCTGCCATTGTGTGCTTTGGTGATAAGCAGCGGTTCATTGGCTCTGCTGGTGCTGCCTCCAGTATGATGAACCCTAAGAATTCAATATCACAGTTTAAGAGGCTCATTGGTAGAAAATTCTCTGATCCCGAATTGCAACGGGATCTTCAGTCATTGCCGTTTCTTGTTACCGAGGGGAATGATGGGTACCCGTTGATTCACGTGCAGTACTTGGGTGAGGCTAGGAAATTTACACCTACACAAGTGTTTGGCATGATGTTGTCGAATCTTAAGGAAATTGCAGAGAAGAATCTCAGTACGGCTGTTGTTGATTGTTGCATTGGAATTCCGGCTTATTTTACTGATTTGCAGAGGAGGGCGGTGTTGGATGCGGCCACGATTGTTGGTCTGCACCCGCTGCAATTGATTCACGAGATGACTGCCACTGCCTTGGCATATGGGATTTATAAAACGGATCTTCCAGAAAACGATCAACTGAATGTTGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGTTGAAAGTGTTGGCTCATTCATATGATAGGTCTTTAGGTGGTAAGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTACTAAGTTCAAGGAGGAGTATAAGATTGATGTTGTCCAGAATACTAGGGCTTGCATAAGGTTGAGGGCTGCCTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATAGTGAGGCACCTCTCAACATCGAGTGTTTGATGGACGAGAAGGATGTTCGGGGCTTCATGAAGCGAGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAGGGGACCTTTGGAGAGGGCACTTGCTGAAGCAGGTCTTACCATTGAAAATGTACATTCGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTACCTGCCGTAAATAAAATATTGACCGAGTTTTTCAAGAAAGAGCCTAGACGAACAATGAATGCTAGTGAGTGTGTTGCTAAGGGTTGTGCATTGGAATGTGCAATTCTTAGTCCCACGTTTAAAGTACGAGAATTTCAGATCAATGAAAGCCTTCCTTTCTCGATTTCCCTTACATGGAAAAGTACTGGTCCAGATGCACAGGACAATGCACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCAATCCCAAGTATCAAAGCTCTAACATTCTACAGGTCAGGAACATTTTCTATTGATGTACATTATGGCGATGTTAGTGAGCTGCAAACACCTGCCAAGATTAGCACATATACTATTGGTCCATTCCAAACTGCAAATAGTGAAAGGACAAAAGTGAAAGTGAAAGTTCGTTTGAATATTCATGGAATTGTATCTCTCGAGTCTGCAATGCTCCTGGAAGAAAAAGAAGTTGAGGTTCCGATTACCAAAGAAGCAGCAGGGGAAAATACTAAGCCGAACGAAGCCCCAGTTGAGGTTGCTACACCTCCAGTCTCCAATGACACTAGTGCAAACGTGCAAGATGCAAAGGTTAGTACTGCTTCGGGAGCTGAAAATGGTGTTCCTGAGAATGGAGATAAGCCTTCGCAAACAAACACTGATACCAAGGCTCCAAAGAAAAAGGTAAAAAAAACAAGCATTTCTGTATCAGAGGTAGTTTATGGAGCAATGGTCTCTTTGGATGTCCAAAAAGCAATAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAGGAAACGAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTCGTCATTGCTTCAGAGAGAGAAGATTTTACTGCCAAACTCCAGGAAGTGGAAGACTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAGCTTGAAGAACTAAAAAAGCAAGGTGATCCAATTGAAGGGCGTTACAAAGAATACATGGAGAGGGGTAGTATAATTGAGCAATTCATATATTGTATAAATAGTTATAGAGAAGCTGCAAAGTCGAAGGACCCCAAATTTGATCACATTGACATTAGTGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAGAAATGGTTTACGGAGAAGCAACAACAACAAAACCCACTTCCAAAATATGTCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAGATTGTTGATAGGTTCTGCAAGCCAATTATGACAAAACCAAGGCCAACCAAACCACCTACTTCAACTGGATCAGGAGCCCCATCTCCGCAGGATGATGAGCAGCAACACCCTCGAGGGGATGATAATGCCAACAGTAACGAAAATACTGGGGATAGAAGTAGCCAACCAATGGAGACTGATAAGTCTGAGAACGCAGGCTCTGCATAA 2523 0.43 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGSAGAASSMMNPKNSISQFKRLIGRKFSDPELQRDLQSLPFLVTEGNDGYPLIHVQYLGEARKFTPTQVFGMMLSNLKEIAEKNLSTAVVDCCIGIPAYFTDLQRRAVLDAATIVGLHPLQLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGKDFDEVLFHHFATKFKEEYKIDVVQNTRACIRLRAACEKMKKMLSANSEAPLNIECLMDEKDVRGFMKRDEFEQLSLPILERVRGPLERALAEAGLTIENVHSVEVVGSGSRVPAVNKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQINESLPFSISLTWKSTGPDAQDNAPENQQSSLVFPKGNPIPSIKALTFYRSGTFSIDVHYGDVSELQTPAKISTYTIGPFQTANSERTKVKVKVRLNIHGIVSLESAMLLEEKEVEVPITKEAAGENTKPNEAPVEVATPPVSNDTSANVQDAKVSTASGAENGVPENGDKPSQTNTDTKAPKKKVKKTSISVSEVVYGAMVSLDVQKAIEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELKKQGDPIEGRYKEYMERGSIIEQFIYCINSYREAAKSKDPKFDHIDISEKQKVINECVEAEKWFTEKQQQQNPLPKYVNPVLLSAEIRKKAEIVDRFCKPIMTKPRPTKPPTSTGSGAPSPQDDEQQHPRGDDNANSNENTGDRSSQPMETDKSENAGSA* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02018 840 PRINTS 70kDa heat shock protein signature 2 15 - -
Phac10g02018 840 PRINTS 70kDa heat shock protein signature 30 42 - -
Phac10g02018 840 PRINTS 70kDa heat shock protein signature 363 383 - -
Phac10g02018 840 PRINTS 70kDa heat shock protein signature 332 348 - -
Phac10g02018 840 PRINTS 70kDa heat shock protein signature 140 160 - -
Phac10g02018 840 MobiDBLite consensus disorder prediction 511 576 - -
Phac10g02018 840 Gene3D Actin; Chain A, domain 4 230 313 - -
Phac10g02018 840 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 707 788 IPR029048 -
Phac10g02018 840 MobiDBLite consensus disorder prediction 788 803 - -
Phac10g02018 840 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Phac10g02018 840 MobiDBLite consensus disorder prediction 530 566 - -
Phac10g02018 840 FunFam Heat shock 70 kDa protein 4 109 207 - -
Phac10g02018 840 FunFam Heat shock 70 kDa protein 4 1 75 - -
Phac10g02018 840 PANTHER HSC70CB, ISOFORM G-RELATED 1 832 - -
Phac10g02018 840 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 624 IPR029047 -
Phac10g02018 840 CDD HSPA4_like_NDB 2 381 - -
Phac10g02018 840 FunFam Heat shock 70 kDa protein 4 230 313 - -
Phac10g02018 840 MobiDBLite consensus disorder prediction 778 840 - -
Phac10g02018 840 MobiDBLite consensus disorder prediction 813 840 - -
Phac10g02018 840 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Phac10g02018 840 FunFam Heat shock 70 kDa protein 4 38 113 - -
Phac10g02018 840 Gene3D - 593 701 IPR029048 -
Phac10g02018 840 Gene3D - 5 374 - -
Phac10g02018 840 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 595 690 IPR029048 -
Phac10g02018 840 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 536 IPR029047 -
Phac10g02018 840 Gene3D - 186 360 - -
Phac10g02018 840 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Phac10g02018 840 Gene3D - 38 113 - -
Phac10g02018 840 Pfam Hsp70 protein 3 691 IPR013126 GO:0005524|GO:0140662
Phac10g02018 840 FunFam Heat shock 70 kDa protein 4 591 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02018 Phac-Chr10 41967649 41972936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02018 4 401 Calmodulin-binding Proteins AT1G16030 36.160 5.77e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02018 K09489 - gmx:100816539 1400.96