Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g02007 ATGGATTTCTGGCCAGAATTTCTTGCAAGCAGTTCGGGAAGAGAGTTTGTAGCAGGTGGGTTTGGAGGCATTGCTGGTATAATTTCAGGTTATCCACTTGACACCCTCCGCATCAGATTACAGAACACAAAAAATGGCTCTGCTTTCGCCATCTTTAGGCACATGGTGTTTAGGGAAGGACCAACTTCTTTGTACCGCGGCATGGCCGCACCACTAGCCTCTGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCGGTTCTGTCAAGGGCATTTGACACACCCGTTTCTCCCAAAGACCCTGCATCCTACAAGGGTGTTGCATTAGGAGGAACTGGAACTGGGGCACTCCAAAGTCTATTGCTTTCCCCTGTAGAGTTGATCAAAATTCAACTTCAGCTGCTGAAGAAAGGGCACATGACAGAATCCACAAAAGGTCCCATGAAGCTGGCCAAAAAGATTTGGAGAAAAGAAGGGCTTCGAGGCATTTATCGAGGACTTGGTGTCACTGTGCTGAGGGATGGACCCTCTCATGGTTTATACTTCTGGACATATGAATACATGAGGGAACGGTTTCACCCTGGTTGCAGAAAAAATGGTGAAGAAAGTTTGAAGACTATGTTAGTAGCTGGAGGATTAGCAGGGGTGGCTAGTTGGATCAGTTGCTACCCTTTTGATGTTGTGAAGACTAGATTACAGGCTCAAACACCCTCTTCTCTCAAGTACAAAGGCATCGTAGATTGTTTCAAAAAGAGTGTTAAAGAAGAAGGCTACAGTGTTCTATGGCGGGGTTTAGGAACTGCAATTACCAGAGCTTTCCTCGTAAATGGGGTCATATTTTCTGCTTATGAGGTTACACTAAGATTACTGTTTAACAATGGAAGTATTCATATGAAAGAAACTCTTTAG 912 0.4441 MDFWPEFLASSSGREFVAGGFGGIAGIISGYPLDTLRIRLQNTKNGSAFAIFRHMVFREGPTSLYRGMAAPLASVTFQNAMVFQTYAVLSRAFDTPVSPKDPASYKGVALGGTGTGALQSLLLSPVELIKIQLQLLKKGHMTESTKGPMKLAKKIWRKEGLRGIYRGLGVTVLRDGPSHGLYFWTYEYMRERFHPGCRKNGEESLKTMLVAGGLAGVASWISCYPFDVVKTRLQAQTPSSLKYKGIVDCFKKSVKEEGYSVLWRGLGTAITRAFLVNGVIFSAYEVTLRLLFNNGSIHMKETL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g02007 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 291 - -
Phac10g02007 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Phac10g02007 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Phac10g02007 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Phac10g02007 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Phac10g02007 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Phac10g02007 303 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
Phac10g02007 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Phac10g02007 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Phac10g02007 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Phac10g02007 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Phac10g02007 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Phac10g02007 303 Gene3D Mitochondrial carrier domain 12 297 IPR023395 -
Phac10g02007 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g02007 Phac-Chr10 41919244 41921529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g02007 1 294 Antiporters AT1G79900 70.847 3.60e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g02007 K15109 - gmx:100812056 510.375