Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01984 ATGAGTCGCTCATTGAAAGCTTTCAACAAACACCTCTCTCTCCTTCCGCTACCTCTACACCTACGCACTTTTTCTGCCCATCCCTTCATAACTTCCTCTTCTTTCCCTCTTTTCCCACATCACGTCTCCTTCCCCAGGTTCTCTTTCTCTAAGCTTCATCCACTTTCGTCATCTGCACCTGCTACATTAATGGAGGTGGTAAAAGCAATTGCTAAGCAAGAATCTACAGCTCATGAAAATGTTGCTATCAGGGCTGATCAGAAGAGCTATAGTTACAAGGAACTCATCTCATCAGCACAGAAGATATCTAATCTCTTGTGTGCCAGTGATGCACAAACAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATAATTGGGATTTGGCTCAGTGGAGGTGTTGCTGTTCCCCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTGATAATGCGGATATATCTGCAATACTGAGTACTGAAGAGCATAGTGAATTAATGCAAACCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCATCTGTTGTCAACACGTCTTCAGAGAAAAGCAGAGATGAACGCCAACAGAATGGGAAAATTCATGCAGACAGGATTTTGTTGGATAATATTATTGGAGGATCAGGTGAAGAAGATCCAGCACTGATTTTGTACACCAGTGGGACTACCGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATAATTTCCCAGGTCCAAACTTTGGCAAAAGCATGGGAATACACGGCTGCTGACAAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTACACAGGTTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGCGAATCATATCCAACTGATGGTTCTAAGGCCGACGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATAATGCAATGGATCCTGAGCTTCAACGTGTTTCGGCGTCTGCTGCAAATAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCAGGAACCGTGGGCAAACCATTTCCCGGTATACAGGTAAAGATTATTGCAGATGAAGAGAGTGAGAATGACTATAATTCTGGAATGGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACCAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTACATCATTTTAGGACGTACTAATGCTGATATAATCAAAGCTGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATCATAGAGCATCCAGCTGTCTCAGAATGTGTCATTTTAGGATTACCAGACAAAGACTATGGAGAGATTGTAGGTGCAATCATTGTGCCACATGCTGATGTTAAAGCAAAGCAAGATCAAAAATCAAAGCCTGTTCTAACCCTAGAAGAATTATCCACCTGGGCCAAAGAAAAAATTGCACCTTATAAGATTCCAACTAAACTAATCCTGTGGGAGAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAACTGGTGGTTTCAGAACAATGA 1830 0.4224 MSRSLKAFNKHLSLLPLPLHLRTFSAHPFITSSSFPLFPHHVSFPRFSFSKLHPLSSSAPATLMEVVKAIAKQESTAHENVAIRADQKSYSYKELISSAQKISNLLCASDAQTGNLGGARIGIVAKPSAEFVAGIIGIWLSGGVAVPLATSYPEVELLYVIDNADISAILSTEEHSELMQTVANKSSSQFFHLPSVVNTSSEKSRDERQQNGKIHADRILLDNIIGGSGEEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLAKAWEYTAADKFLHCLPLHHVHGFFNGLMAPLYTGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQRVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESENDYNSGMGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECVILGLPDKDYGEIVGAIIVPHADVKAKQDQKSKPVLTLEELSTWAKEKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKLVVSEQ* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01984 609 Gene3D - 496 608 IPR045851 -
Phac10g01984 609 Pfam AMP-binding enzyme 74 499 IPR000873 -
Phac10g01984 609 ProSitePatterns Putative AMP-binding domain signature. 236 247 IPR020845 -
Phac10g01984 609 Gene3D - 66 493 IPR042099 -
Phac10g01984 609 CDD MCS 81 603 - -
Phac10g01984 609 SUPERFAMILY Acetyl-CoA synthetase-like 60 606 - -
Phac10g01984 609 PANTHER ACYL-COA SYNTHETASE 60 603 - -
Phac10g01984 609 FunFam Acyl-CoA synthetase family member 3 72 493 - -
Phac10g01984 609 Pfam AMP-binding enzyme C-terminal domain 510 595 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01984 Phac-Chr10 41813674 41820397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01984 230 607 Monolignol Biosynthesis Gene Families AT4G19010 26.768 7.59e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01984 K18660 - gmx:100813324 1017.68