Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01982 ATGGAGGTGGTAAAAGCAATTGCTAAGCAAGAATCTACAGCTCATGAAAATGTTGCTATCAGGGCTGATCAGAAGAGCTATAGTTACAAGGAACTCATCTCATCAGCACAGAAGATATCTAATCTCTTGTGTGCCAGTGATGCACAAACAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATAATTGGGATTTGGCTCAGTGGAGGTGTTGCTGTTCCCCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTGATAATGCGGATATATCTGCAATACTGAGTACTGAAGAGCATAGTGAATTAATGCAAACCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCATCTGTTGTCAACACGTCTTCAGAGAAAAGCAGAGATGAACGCCAACAGAATGGGAAAATTCATGCAGACAGGATTTTGTTGGATAATATTATTGGAGGATCAGGTGAAGAAGATCCAGCACTGATTTTGTACACCAGTGGGACTACCGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATAATTTCCCAGGTCCAAACTTTGGCAAAAGCATGGGAATACACGGCTGCTGACAAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTACACAGGTTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGCGAATCATATCCAACTGATGGTTCTAAGGCCGACGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATAATGCAATGGATCCTGAGCTTCAACGTGTTTCGGCGTCTGCTGCAAATAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCAGGAACCGTGGGCAAACCATTTCCCGGTATACAGGTAAAGATTATTGCAGATGAAGAGAGTGAGAATGACTATAATTCTGGAATGGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACCAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTACATCATTTTAGGACGTACTAATGCTGATATAATCAAAGCTGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATCATAGAGCATCCAGCTGTCTCAGAATGTGTCATTTTAGGATTACCAGACAAAGACTATGGAGAGATTGTAGGTGCAATCATTGTGCCACATGCTGATGTTAAAGCAAAGCAAGATCAAAAATCAAAGCCTGTTCTAACCCTAGAAGAATTATCCACCTGGGCCAAAGAAAAAATTGCACCTTATAAGATTCCAACTAAACTAATCCTGTGGGAGAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAACTGGTGGTTTCAGAACAATGA 1641 0.4174 MEVVKAIAKQESTAHENVAIRADQKSYSYKELISSAQKISNLLCASDAQTGNLGGARIGIVAKPSAEFVAGIIGIWLSGGVAVPLATSYPEVELLYVIDNADISAILSTEEHSELMQTVANKSSSQFFHLPSVVNTSSEKSRDERQQNGKIHADRILLDNIIGGSGEEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLAKAWEYTAADKFLHCLPLHHVHGFFNGLMAPLYTGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQRVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESENDYNSGMGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECVILGLPDKDYGEIVGAIIVPHADVKAKQDQKSKPVLTLEELSTWAKEKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKLVVSEQ* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01982 546 Gene3D - 433 545 IPR045851 -
Phac10g01982 546 ProSitePatterns Putative AMP-binding domain signature. 173 184 IPR020845 -
Phac10g01982 546 PANTHER ACYL-COA SYNTHETASE 14 540 - -
Phac10g01982 546 CDD MCS 18 540 - -
Phac10g01982 546 FunFam Acyl-CoA synthetase family member 3 9 430 - -
Phac10g01982 546 SUPERFAMILY Acetyl-CoA synthetase-like 7 543 - -
Phac10g01982 546 Gene3D - 4 430 IPR042099 -
Phac10g01982 546 Pfam AMP-binding enzyme 11 436 IPR000873 -
Phac10g01982 546 PRINTS AMP-binding signature 180 188 IPR020459 -
Phac10g01982 546 PRINTS AMP-binding signature 168 179 IPR020459 -
Phac10g01982 546 Pfam AMP-binding enzyme C-terminal domain 447 532 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01982 Phac-Chr10 41813674 41820397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01982 167 542 Monolignol Biosynthesis Gene Families AT4G19010 26.904 1.47e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01982 K18660 - gmx:100810130 942.184