Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01971 ATGATGGCTGGAAACCCTAACTGGTGGACTGCACATCCACCATCTCTGATCCCTCCCCAGTATGCTCTTGGATCTTCTTCAATACCCTTTAATTCTTCCTCACAGAACCCTGAGCCCCCTCACTCTTTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAGGAGAGAGTGGCATTCAGTCATTTTCAATCAAAAAAGTTGGATGAATGGAATGAGCACATGCTTAATCAATCCCATATAAATCCTATGGTTGATGTAATAAAGCAAGAGGTTGCCCAAAGTGGAAACTTCTATCACCATGATCAAGAATTTCAGGTCTCTGGAGCACCTTGGTCACACATGGTGCCAGTTTCTTCTTCCCCTAGGTCTAGTGTTGCTAGCTTCAGTAGTGATAATTTATTGGATTCCCCTTATAACAAGGAAGAACATAGGAAGAATCAACTACCAGATCACACATCCGAGTGTAATACCACAGGCAGTGGTGGAGTTTATAAGAAGACTAAAAGTCAGCCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGAGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTGAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGAGAAGGCAAAGGACTTGAGGACTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGCACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGCAGTGGATTTTAA 948 0.442 MMAGNPNWWTAHPPSLIPPQYALGSSSIPFNSSSQNPEPPHSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNQSHINPMVDVIKQEVAQSGNFYHHDQEFQVSGAPWSHMVPVSSSPRSSVASFSSDNLLDSPYNKEEHRKNQLPDHTSECNTTGSGGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKEKAKDLRTRGLCLVPVSCTQHVGNENGADYWAPAYGSGF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01971 315 MobiDBLite consensus disorder prediction 241 280 - -
Phac10g01971 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 231 IPR036638 GO:0046983
Phac10g01971 315 MobiDBLite consensus disorder prediction 152 178 - -
Phac10g01971 315 FunFam Transcription factor bHLH123 family 180 243 - -
Phac10g01971 315 CDD bHLH_AtbHLH_like 180 227 IPR045239 -
Phac10g01971 315 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 297 - -
Phac10g01971 315 MobiDBLite consensus disorder prediction 137 151 - -
Phac10g01971 315 MobiDBLite consensus disorder prediction 123 180 - -
Phac10g01971 315 Gene3D - 180 236 IPR036638 GO:0046983
Phac10g01971 315 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01971 Phac-Chr10 41773657 41777763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01971 150 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 69.027 1.16e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01971 - - gmx:100802121 580.482