Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01951 ATGACACAAACAACAACCTCGTCTGAAACATCTTCTACGTCGTCGCCGTCCTCGGCTTCGGGCTCGAAGGTTCAGGCCCGGGCCAAGAGGCCCAGAGAATGCAGCAAGCACCCGGTGTACCACGGCGTACGGAAGCGCAATTGGGGCAAATGGGTCTCGGAAATCCGGGAACCGCGGAAGAAGTCGCGCATCTGGCTCGGAACCTTCGCCACCCCCGAAATGGCGGCGCGGGCCCATGACGTGGCGGCGCTCACCATCAAGGGCCAATCGGCAATCCTGAACTTCCCAAAAATAGCAGGCCTGCTCCCGCGCCCCCTCACGTGCTCCCCACGTGACATTCAAGCCGCCGCCACCGCCGCCGCCTCCATGTCTAAATTCGACCCCGCCGCAACGCAAACCTCGGACTCCGAGACAGAAACTTCCCAGGAATCCGAACTGAGCGAGATAGTGGAGCTTCCGAACATCGAGGACAGCTTTGAGTCGTCCGTTGAGTCGTTCTTGACGGTGGACGTGGTAGACAGTTGGATGTTTCCGCCGTTGGAGTCGTTCTGCGCGGCGTTTTCCGACGAGTTATTTCCGCAATTGGGTTGCTTCCCCACCCAGAATGAAATCATTTCATACACGGTCTGA 630 0.5889 MTQTTTSSETSSTSSPSSASGSKVQARAKRPRECSKHPVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALTIKGQSAILNFPKIAGLLPRPLTCSPRDIQAAATAAASMSKFDPAATQTSDSETETSQESELSEIVELPNIEDSFESSVESFLTVDVVDSWMFPPLESFCAAFSDELFPQLGCFPTQNEIISYTV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01951 209 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Phac10g01951 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 158 - -
Phac10g01951 209 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Phac10g01951 209 MobiDBLite consensus disorder prediction 125 146 - -
Phac10g01951 209 MobiDBLite consensus disorder prediction 1 24 - -
Phac10g01951 209 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Phac10g01951 209 MobiDBLite consensus disorder prediction 1 38 - -
Phac10g01951 209 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Phac10g01951 209 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Phac10g01951 209 MobiDBLite consensus disorder prediction 124 146 - -
Phac10g01951 209 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Phac10g01951 209 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Phac10g01951 209 Pfam AP2 domain 38 88 IPR001471 GO:0003700|GO:0006355
Phac10g01951 209 CDD AP2 40 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01951 Phac-Chr10 41708055 41709065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01951 7 179 AP2-EREBP Transcription Factor Family AT5G11590 50.777 7.31e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac10g01951 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01951 K09286 - gmx:100804056 272.707