Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01946 ATGAACAAGCTGCTGATGGAGGAGAACGATAGGTTGCAGAAACAGGTGTCTCAACTGGTGTATGAAAATGGTTATTTTCGTCAACACACCCAAAATGTAAGAATTTTCATGGGGCTTTCGATGCAGACTACGCAGGCAACCAAAGACACAAGTTGTGAATCAGCGGTGACGAGTGGTCAGCACAGTTTGACAACTCAACATCCCCCACGGGATGCGAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAATTTCTTTCTAAGGCTACTGGGACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCTCTGGTGTGGCAGCAAGAGCTTGTGGTCTAGTGGGACTAGAGCCCACTAGGGTTGCAGAAATCCTCAAAGATCGGCCATTGTGGTTTCGCGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCAAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTATATGCACCAACCACATTGGCACCTGCCCGAGATTTCTGGTTGTTGCGCTATACTTCTGTTTTAGAAGATGGAAGTCTAGTGATCTGTGAGAGATCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCTACTGTGCAACACTTTGTTAGGGCAGAGATGCTGCCTAGTGGGTACTTAGTCAGACCTTGTGAAGGAGGTGGTTCCATCATCCATATTGTTGATCATATGGATTTAGAGCCATGGAGTGTACCAGAAGTGCTACGGCCACTGTACGAATCATCAACAGTGCTGGCTCAGAAGACAACTATGGCGGCCCTACGTCATTTAAGGCAGATCTCACATGAAGTTTCTCAGTCTAATGTCACTGGGTGGGGTAGACGACCAGCAGCCCTACGAGCTCTTAGCCAAAGATTGAGCCGGGGTTTCAATGAGGCACTCAATGGGTTCACTGATGAGGGATGGACAACAATTGGCAATGATGGTGTAGATGATGTTACTATTCTAGTGAATTCATCCCCTGACAAATTAATGGGTCTGAATCTCCCCTTTACCAACGGATTTCCTTCTGTCAGTAATGCAGTGCTATGTGCCAAAGCATCCATGCTATTACAGAATGTGCCCCCTGCCATTCTCCTAAGGTTCCTGCGGGAGCATAGATCTGAATGGGCAGACAACAATATGGATGCTTACACAGCTGCTGCTATTAAAGTTGGTCCTTGCAGCTTATCAGGATCTCGTGTTGGAAATTATGGAGGTCAAGTTATACTCCCTCTAGCACACACAATTGAGCATGAAGAGTGTTTGGAAGTCATTAAATTGGAAGGAGTTGCTCATTCTCCTGAAGACACGATAATGCCCAGAGAAATGTTTCTCTTACAACTCTGCAGTGGAATGGATGAGAATGCTGTGGGCACCTGTGCTGAACTTATATCTGCTCCAATTGATGCTTCTTTTGCTGATGATGCCCCCCTTCTACCTTCCGGATTTCGCATTATTCCTCTTGAGTCTGGAAAGGAAGCTTCCAGCCCCAATCGCACCCTTGACCTTGCATCTGCCCTTGACATTGGCCCTAGTGGAAACCGAGCCTCAAATGAATGTGCTGGAAATTCCAGCTGTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGCCATATGCAAGAGCATGTAGCATCTATGGCTCGCCAATATGTTCGGAGCATTATATCATCAGTCCAAAGGGTAGCATTAGCACTTTCTCCTTCTCATTTGAGTTCACAGGCAGGGCTCAGGTCACCATTGGGCACTCCTGAAGCACAAACCCTTGCTCACTGGATCTGCAACAGTTACAGGTGCTACTTGGGTGTGGAGTTACTCAAATCTAACAACGAGGGGAATGAATCTTTGCTGAAGTCCTTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTGAAGGTATACTTGAAATTTATTTCAACTTCATAG 2007 0.4614 MNKLLMEENDRLQKQVSQLVYENGYFRQHTQNVRIFMGLSMQTTQATKDTSCESAVTSGQHSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPLWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPTVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRHLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWTTIGNDGVDDVTILVNSSPDKLMGLNLPFTNGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEECLEVIKLEGVAHSPEDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEASSPNRTLDLASALDIGPSGNRASNECAGNSSCMRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSQAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKVYLKFISTS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01946 668 MobiDBLite consensus disorder prediction 50 72 - -
Phac10g01946 668 SUPERFAMILY Bet v1-like 316 515 - -
Phac10g01946 668 Gene3D - 114 295 IPR023393 -
Phac10g01946 668 SUPERFAMILY Bet v1-like 79 289 - -
Phac10g01946 668 MobiDBLite consensus disorder prediction 50 69 - -
Phac10g01946 668 CDD START_ArGLABRA2_like 74 289 - -
Phac10g01946 668 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 664 IPR044830 GO:0003700
Phac10g01946 668 SMART START_1 79 289 IPR002913 GO:0008289
Phac10g01946 668 Pfam MEKHLA domain 614 659 IPR013978 -
Phac10g01946 668 Pfam START domain 80 288 IPR002913 GO:0008289
Phac10g01946 668 ProSiteProfiles START domain profile. 70 284 IPR002913 GO:0008289
Phac10g01946 668 FunFam homeobox-leucine zipper protein ATHB-15 115 296 - -
Phac10g01946 668 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01946 Phac-Chr10 41656434 41665427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01946 1 664 Homeobox Transcription Factor Family AT1G52150 82.132 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01946 K09338 - gmx:100800165 1256.12