Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01943 ATGCCGGTGATTCGTAACGGAGCGAGCAGGGGCCGGGGAGCAGCGAAACAACAGGAGCGGCAACAGGGTCCAGCGGCGGAAGGGGAGGCGATTGCGACGAGGACCCGGAGGCGGCGTGCGGCGGCGGCGGCGGCAGCAGTGCCGAAGAGTAACAACAACATCAACAACGACGAAAATAATAAGTGCAAGCAGCAACAGCAGCACCAGCCGGAGCAGGTGGTGGTGGTAAATGAGAACGTAGTTGTTGCGGCGAAGGAAGAAGAGAATCGGGGATTGGGGGAAGGTGTTGGCGCGGGTGGAGCGGAGAGGGAAGAGGTAGGCGAGAAAGAGATGGTTGGATATGACAGTGGAGGTCGGAGCAATGATAAAGCCAATGCCGGTGCTGAAGATGACGCCAATACTCCCGAGGTCCCTCAGAAGATTCAAGTAGGTAATTCCCCTTGTTATAAAGTAGAAAGAAAACTTGGTAAGGGTGGATTTGGTCAGGTATATGTTGGACGACGTTGTAGTGGAAATTTGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAACTTGAGCATAGAACTAGTAAAGGATGTACCTACGGACCACCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCATGGTGTGCCACATGTACACTACAAGGGAAGGCAGGGAGACTATTATGTCATGGTTATGGATATACTGGGACCTAGCCTGTGGGATGTTTGGAATAATAATAACTCTCATTCCATGTCCACTGAAATGGTTGCTTGCATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGATATGTGCACGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACGTCTGATGAGAAAAAACTGTTCCTTGTAGATCTTGGATTAGCTACTAAGTGGAGGGATAGTACAACAGGCTCACATGTGGAATATGATCAAAGGCCAGATGTTTTTAGAGGCACAGTCCGCTATGCTAGCGTTCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACATTGATTTTCCTTCTCCGAGGTCGCCTTCCTTGGCAGGGATTCCAGGGAGAAAACAAAGGTTTCCTAGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATTATTTGCTGCTTTTGTCCCCAACCTTTTAAGCTGTTTGTTGAACATGTTGTGAACTTAAAGTTTGATGAAGAACCCAATTATGCAAAATACATTTCTTTATTTGATGGGATTGTTGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGCCGATTAGCTATGGAAGAAGAAGACGATGACCAGCCAAAAAAGAAGGTTCGTATAGGTTTGCCGGCATCACAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATGCAAGGTTATCCCAGCACATTGAGAAAGGAAACGAGGATGGGTTATATATTAGCAGTGTTGCTTCATGTCAGAACGTATGGGCATTAATCATGGATGCAGGGACAGGTTTCGCTGGCCAAGTTTACGAACTCTCACCCTTCTTTCTCCATAAGGAATGGATTGTGGAGCAATGGGAACTAGGTTACTACATCAGCGCAATTGCTGGAGCTGCAAATGGGAGCTCGCTAGTAGTAATGTCCAAGGGCACACAGTTTGTGCAGCAATCATACAAAGTGAGTGATTCATTTCCTTTTAAGTGGATTAACAAAAAGTGGAGGGAGGGGTTTTACGTGACTTCAATGGCCACCTCAGGGCCCAGATGGGGAGTCGTCATGTCTCGTGGTGCAGGATATTCAGACCAGGTTATTGAACTAGACTTTCTGTATCCTAGTGAGGGGATTCACAAGCGGTGGGATAGCGGTTATAGAATCACATCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTCAGCGTCCCAAGGAGGAAGCCTGTAGATGAAACCCAGGAAACACTTAGGACTTCTGCTTTTCCCAGTACACATGTCAAGGAGAAGTGGGCTAAGAACCTCTACATTGCTTCTATTTGCTACGGACGTACAGTTTCTTGA 2142 0.4678 MPVIRNGASRGRGAAKQQERQQGPAAEGEAIATRTRRRRAAAAAAAVPKSNNNINNDENNKCKQQQQHQPEQVVVVNENVVVAAKEEENRGLGEGVGAGGAEREEVGEKEMVGYDSGGRSNDKANAGAEDDANTPEVPQKIQVGNSPCYKVERKLGKGGFGQVYVGRRCSGNLNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPHVHYKGRQGDYYVMVMDILGPSLWDVWNNNNSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEIICCFCPQPFKLFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDDQPKKKVRIGLPASQWISVYNARRPMKQRYHYNVSDARLSQHIEKGNEDGLYISSVASCQNVWALIMDAGTGFAGQVYELSPFFLHKEWIVEQWELGYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGPRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITSTAATWDQAAFVLSVPRRKPVDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01943 713 Gene3D Transferase(Phosphotransferase) domain 1 115 468 - -
Phac10g01943 713 MobiDBLite consensus disorder prediction 1 74 - -
Phac10g01943 713 FunFam casein kinase 1-like protein HD16 121 469 - -
Phac10g01943 713 PANTHER CASEIN KINASE-RELATED 148 678 - -
Phac10g01943 713 ProSitePatterns Protein kinases ATP-binding region signature. 155 187 IPR017441 GO:0005524
Phac10g01943 713 CDD STKc_CK1 149 425 - -
Phac10g01943 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Phac10g01943 713 Pfam Protein kinase domain 149 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01943 713 SMART serkin_6 149 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01943 713 MobiDBLite consensus disorder prediction 86 141 - -
Phac10g01943 713 ProSiteProfiles Protein kinase domain profile. 149 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01943 713 MobiDBLite consensus disorder prediction 101 116 - -
Phac10g01943 713 MobiDBLite consensus disorder prediction 48 74 - -
Phac10g01943 713 SUPERFAMILY Protein kinase-like (PK-like) 148 429 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01943 Phac-Chr10 41630276 41636321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01943 230 425 MAP Kinase Kinase Kinase AT5G50180 24.121 1.74e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Phac10g01943 Pkinase 7.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01943 - - gmx:100799630 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01943 10 41630276 41636321 Phac10g01943 10 41630276 41636321 ECH