Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01931 ATGTTCTCCTCCAATGCATACTCCTCCATGTGCAAGTCGGGCATAGGTGGGTGGTCTTCGGGTAGTGACTTCTCAGCTTCACAGAGGAGGCGTTCTGCTCCATCGAGAGTGACGTGTTGTGCTTCAACTTCGAGCAGCGGCAAAACTCACGGCGGCTTTGTGATGGAGGAAGAGGCCAATGGGGCTTCCACGGAGGTCGGCGAAAGCCCAATCACCGGCGGCGGCGTCCGGGACGTGTACGGCGAGGATAGAGCCACTGAGGACCAGGGTGTGACTCCGTGGAATGTCTCTGTTTCTTGTGGGTATACTTTGTTGAGAGATCCTCACTTCAACAAAGGACTCGCCTTCACTGATAAAGAGAGGGACTCCCACTACTTGCGTGGCCTTCTTCCCCCATCTGTTCTTTCTCAAGAAACTCAGGTAAAGAAAATGATCCAACACATACGCCAGTATGAAGTTCCATTGCACAAGTTCGTGGCAATGATGGATCTTCAGGGGAGAAATGAAAGATTGTTCTATAGGCTTCTGCTTGATCATGTTGAGGAGTTACTACCAGTTGTCTATACTCCAACAGTTGGTGAAGCATGCCAGAAATATGGGAATATCTTCATGAGTCCTCAGGGACTTTATATAAGTTTGAAGGATAAAGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAGGAACATTCAAGTCATTGTTGTAACTGATGGAGAGAGAATTCTGGGCCTTGGGGATCTTGGTTGTCAGGGAATGGGAATACCGGTAGGAAAACTCTCTTTATATACAGCACTTGGTGGAGTTCGTCCTTCTTCTTGCTTGCCTATTACCATCGATGTGGGTACAAACAATGAGAATTTGTTGAATGAAGAATTCTATATAGGACTCAGGCAGAAACGGGCAACTGGGCAGGAATATGCTGAGCTTCTGCAAGAATTTATGAATGCAGTCAAGCAGAATTATGGTGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTACTTGAAAAATATAGGTCAACACATCTTGTCTTTAATGATGATATTCAGGGAACAGCATCAGTGGTTCTTGCAGGACTAATTGCAGCTCTGAAATTGGTTGGGGGAGACTTGCCTGATCACAAGTTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACTTCAAAACGGACAAAACTCCCAGTAGAAGAAATGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTGGATTCCCGCAAAGAATCACTTCAACATTTTAAGAAACCCTGGGCTCATGAACATGAACCTGTTGAGGAACTTGTAGATGCTATTAATGAAATTAAGCCAACAGTTTTAATTGGAACATCAGGACGAGGAAGAACTTTTACTAAGGAAGTGATTGAAGCTATGGCTTCCTTGAATGAGAAACCTATTATTCTTTCCCTTTCCAACCCCACATCACAGTCAGAATGCACTGCTGAAGAAGCTTACACTTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGGAGCCCTTTTGACCCAGTTGAATATGATGGAAAAGTGTTTATGCCTGGCCAGTCCAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGAACCATTCGTGTCCATGATGACCTGCTTCTGGCAGCTGCTCAAGCTTTGGCTTCACAGGTGGCTGAGGAGGACTATGACAAGGGGCTCATATACCCTCCGTTCTCCAACATCAGAAAGATTTCAGCACATATAGCTGCCAAAGTGGCTGCTAAGGCCTATGAACTTGGCTTGGCCACTAACATTCCTCAGCCAAAAGATTTGATGAAGTTTGCTGAGAGCTCTATGTATACACCAGCCTATAGAGACTACCGGTGA 1923 0.4519 MFSSNAYSSMCKSGIGGWSSGSDFSASQRRRSAPSRVTCCASTSSSGKTHGGFVMEEEANGASTEVGESPITGGGVRDVYGEDRATEDQGVTPWNVSVSCGYTLLRDPHFNKGLAFTDKERDSHYLRGLLPPSVLSQETQVKKMIQHIRQYEVPLHKFVAMMDLQGRNERLFYRLLLDHVEELLPVVYTPTVGEACQKYGNIFMSPQGLYISLKDKGRILEVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNENLLNEEFYIGLRQKRATGQEYAELLQEFMNAVKQNYGEKILVQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLIAALKLVGGDLPDHKFLFLGAGEAGTGIAELIALETSKRTKLPVEEMRKNIWLVDSKGLIVDSRKESLQHFKKPWAHEHEPVEELVDAINEIKPTVLIGTSGRGRTFTKEVIEAMASLNEKPIILSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPVEYDGKVFMPGQSNNAYIFPGFGLGLIMSGTIRVHDDLLLAAAQALASQVAEEDYDKGLIYPPFSNIRKISAHIAAKVAAKAYELGLATNIPQPKDLMKFAESSMYTPAYRDYR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01931 640 PANTHER MALIC ENZYME-RELATED 68 639 - -
Phac10g01931 640 FunFam Malic enzyme 354 640 - -
Phac10g01931 640 SMART Malic_M_2 356 609 IPR012302 GO:0051287
Phac10g01931 640 PRINTS Malic enzyme signature 267 289 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 352 368 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 383 399 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 171 195 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 327 345 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 231 260 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 PRINTS Malic enzyme signature 486 502 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 84 355 IPR046346 -
Phac10g01931 640 Pfam Malic enzyme, NAD binding domain 356 608 IPR012302 GO:0051287
Phac10g01931 640 Gene3D - 99 353 IPR037062 GO:0004471
Phac10g01931 640 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 356 639 IPR036291 -
Phac10g01931 640 PIRSF ME 63 640 IPR001891 GO:0004470|GO:0004471
Phac10g01931 640 Gene3D - 354 640 - -
Phac10g01931 640 FunFam Malic enzyme 99 353 - -
Phac10g01931 640 SMART malic_2 165 346 IPR012301 GO:0004471
Phac10g01931 640 Pfam Malic enzyme, N-terminal domain 165 346 IPR012301 GO:0004471
Phac10g01931 640 CDD NAD_bind_1_malic_enz 356 634 - -
Phac10g01931 640 ProSitePatterns Malic enzymes signature. 352 368 IPR015884 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01931 Phac-Chr10 41587764 41594157 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01931 K00029 - gmx:100785718 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01931 10 41587764 41594157 Phac10g01931 10 41587764 41594157 ECH
Phac10g01931 10 41587764 41594157 Phac7g01151 7 7241470 7243256 ECH
Phac10g01931 10 41587764 41594157 Phac10g01314 10 35724001 35725788 ECH
Phac10g01931 10 41587764 41594157 Phac8g00845 8 5493531 5495817 ECH