Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01916 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGTTTGTTGGGGATGAAGAAGGAGAAGGACCACAGCGACAATTCAGGCTCACTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGGAAGGATGTGCCATCTTCAGTTCCTGCCACAGATAACACCTGGCTCAGATCCTACTTTGATGATACAGAGACTGAGCAGAATAAGCATGCAATTGCTGTTGCCGCCGCCACTGCGGCTGCCGCCGATGCTGCCATGGTTGCCGCACAGGCTGCCGTGGCGGTTGTGAGGCTCACAAGCCAGGGGAGAGGTGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTACTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTCAGATCACAGCGAGCTCGTCGTTCCTTGAGCAAAGAAAGCAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGTTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGTCCCAAGATTGTTGAGATTGATACATACAAGACTCGATCAAGGTCTAGACGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTCTCAGGCAATGTCCTCCCCTCTTCCTTGTCATGTCCCTAGTCGAATCTCGGTTCCTGAATGCAGACACCTTCAAGATTTTGATTGGTACCTCAATGTTGATGAGTGTAGATTCTCCACTGCTCATAGCACACCACGTTTCACAAACTATGCCCGGCCTAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGATACCTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGACCAATACTCAGTCATTCAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGACTCTCACTGAATGAAGTCATGGCTGCAAGAAACAGCATAAGTAGTGTTAGAATGCAAAGGCCATCATCAAATTTCTTCCAGACTCAAGAATCCTGGAATTTTTGA 1188 0.468 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVPSSVPATDNTWLRSYFDDTETEQNKHAIAVAAATAAAADAAMVAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRSQRARRSLSKESRFLPEVLARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSSQAMSSPLPCHVPSRISVPECRHLQDFDWYLNVDECRFSTAHSTPRFTNYARPNAPATPAKSVCGDTFFRPCSNFPNYMTNTQSFKAKLRSHSAPKQRPEPKKRLSLNEVMAARNSISSVRMQRPSSNFFQTQESWNF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01916 395 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Phac10g01916 395 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Phac10g01916 395 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Phac10g01916 395 SMART iq_5 113 135 IPR000048 GO:0005515
Phac10g01916 395 SMART iq_5 136 157 IPR000048 GO:0005515
Phac10g01916 395 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Phac10g01916 395 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Phac10g01916 395 Pfam Protein of unknown function (DUF4005) 302 377 IPR025064 -
Phac10g01916 395 Gene3D - 57 139 - -
Phac10g01916 395 MobiDBLite consensus disorder prediction 1 51 - -
Phac10g01916 395 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01916 Phac-Chr10 41516438 41519562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01916 1 379 IQD Protein Family AT3G16490 54.962 8.72e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01916 - - gmx:100797686 682.174