Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01902 ATGGCAATGCACAAACTGAGTTGTTTCAACAAAACTGTGAGTGTGGACTCAAAGAAACAAGAGTTCACCTACTCAGAGGTTCGAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACCATGGTTGCATAGGTGAAACACAAGTAGCAGTGAAGATGCTCACTGCTTCAACTCAAGGGTATCAGCAATTTCAGACAGAGATAAGCCTCAATGTTTTCAAGTCTGATGGAATAGACTCTGCTATGCAGGCAAATATTCTCACAAGAGTACACCATAAATGCTTGACTCCACTTATTGGATATTACAATGAAGGCAATAGAACAGCACTCATCTATGAATACATGACCAATGGAGACTTATCTCACAAACTATCTGGTGAAAGTCAAACGTCCTTAGATTGGAAACAGAGACTTCAAATTGCACTGGATGCTGCAGTAGGTTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTGTTCACAGAGATGTTAAGACTAGAAACATTTTACTCAATGAAAATCTACGTGCTAAAATATCTGATTTTGGATTGTCAAGGATCTTTCCAGATGAAGGTGACACCATATACTACATAACAAACAGGTTGAATGAAAAAAGTGACGTCTTTAGTTTTGGCGTTGTTCTCCTAGAGATAATCACAGGGCGAAAAGCCATATTGAGAAGCAGTGTGAAAACTCACATAATCGAATGGGTGAGTTCCATTCTGGAAGATGACGGTGAAATTGATGGTATTATGGATCCAAGGTTACAAGGAGATTATGACAGTGAGGCTGCAAGGAAAGTAGTATATGTAGCAATGTGGAACTTAGGAGTGGGTCCATTGAATGAAATCAGTGGATTTAGTTCATTAGAAAGAAGAGCTAACAATAATTTGCTGAGATTGTCTTTAGTCGATATGGGAGTCTGTTTGTAG 954 0.391 MAMHKLSCFNKTVSVDSKKQEFTYSEVRSITNNFERVVGKGGFGTVYHGCIGETQVAVKMLTASTQGYQQFQTEISLNVFKSDGIDSAMQANILTRVHHKCLTPLIGYYNEGNRTALIYEYMTNGDLSHKLSGESQTSLDWKQRLQIALDAAVGLEYLHNGCKPPIVHRDVKTRNILLNENLRAKISDFGLSRIFPDEGDTIYYITNRLNEKSDVFSFGVVLLEIITGRKAILRSSVKTHIIEWVSSILEDDGEIDGIMDPRLQGDYDSEAARKVVYVAMWNLGVGPLNEISGFSSLERRANNNLLRLSLVDMGVCL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01902 317 Gene3D Transferase(Phosphotransferase) domain 1 122 291 - -
Phac10g01902 317 PANTHER OS07G0107800 PROTEIN-RELATED 11 281 - -
Phac10g01902 317 FunFam Os07g0541700 protein 122 209 - -
Phac10g01902 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phac10g01902 317 SMART serkin_6 32 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01902 317 ProSiteProfiles Protein kinase domain profile. 32 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01902 317 Pfam Protein tyrosine and serine/threonine kinase 34 232 IPR001245 GO:0004672|GO:0006468
Phac10g01902 317 ProSitePatterns Protein kinases ATP-binding region signature. 38 59 IPR017441 GO:0005524
Phac10g01902 317 SUPERFAMILY Protein kinase-like (PK-like) 16 276 IPR011009 -
Phac10g01902 317 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01902 Phac-Chr10 41420095 41422286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01902 14 280 Receptor kinase-like Gene Family AT1G51880 52.113 6.81e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac10g01902 PK_Tyr_Ser-Thr 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01902 - - pvu:PHAVU_010G143100g 484.182