Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01899 ATGGATGGTTTGAGTTGGGATACCTCTCAACTTGAAGCAAACACACAAATCCTGTGGAGTACTATTCAGTCACCACCAGACTTTGAAGGAGGCTACTCCATGCCCAATGTTCTCAATCAAATACAAGAATTGGAGAAAGCTCAAACAGGTCATGCACACTCATATTCTGAAAGAGTGATTTATCAGTCAGCAGATGCTACCACCACTTCTTCAGAGATAGTGGATGAGATGCAAAGGCAAAACACAAATCTTTTACAGCATGCACCAACCATGTTGCCAGTGAAATCAGGAACTGGAGCCAGTTGGGGAGAAGCTTTCACATCTCAATCATACCCGTCTCTATCGGTCAATGGAGCTCAAAGTATGAACCTGATTAGCAACTACATGCCAGGTTTCAGCATGGCCCACCAACAACAGCAGCAACAACAACTTGTCAAAGGCTCACAAAATGGGAAGGGTACTTGTTCTCTTGAATCTTTTGACTGCTTGATTTCAGCTACCAATAGCAACCCAGACACATCTGTTGAAGATGATGGGATCTCAATGATTTTATCTGACTGTAGAAACTTGTGGAACTTCAGCCATGGCAGTGCAGCTTCCACTGGTGAATCTGAGAGTAATGCTTCCAATGGTAGAAAGAAAGACATGAAGTGTCCAGTCAATGAAGTTGATGAAACAGTTTCTCAAAGCTCCTTGGATCAAGGAAAAACAGTACAATCAAAGGCTAATTTTTCAAATAGGAGCCCTGAGGAAACTGAAATGATCAAAGTTGGTGCCACTGGCAGTGGTTCCTGCTTCAGTATTGTTCAGAATTCTTCTTCTATTGAAGAAGGTGGATTCAGACTTATCTCAGATGATCCATCAAAAAGGAAGAAACCCAGATGGGACACGAGTTCCTTTTCAAATAATATCAATTTCCAGCAACCAAATTCATCCAGGTCTTCATCCATTGAGGAACCTGATCCAGAGGCCATTGCACAAATGAAGGAAATGATATATAGGGCTGCAGCTTTTAGGCCTGTGAACTTTGGCTTGGATGGTGCTGAAAAGCCAAAGAGGAAGAATGTGAGAATATCAACTGATCCACAAACTGTGGCTGCAAGGCACAGAAGGGAGAGAATAAGTGAGAGGATTAGGGTTTTGCAGAAGCTTGTGCCTGGGGGAAGCAAGATGGACACAGCATCAATGCTTGATGAGGCTGCAAACTACCTCAAGTTTCTCAGGTCACAGGTTAAGGCTCTGGAATGTCTTGGAAACAAAGTTGATGCAATGAATTGTCCTCCTACAAGCATTGCCTTCTCTTTCAACCCTTCTTTTCCTATGCAAACATCTCTCGGTCACATCCATCATTCCCAGGGTTGA 1362 0.431 MDGLSWDTSQLEANTQILWSTIQSPPDFEGGYSMPNVLNQIQELEKAQTGHAHSYSERVIYQSADATTTSSEIVDEMQRQNTNLLQHAPTMLPVKSGTGASWGEAFTSQSYPSLSVNGAQSMNLISNYMPGFSMAHQQQQQQQLVKGSQNGKGTCSLESFDCLISATNSNPDTSVEDDGISMILSDCRNLWNFSHGSAASTGESESNASNGRKKDMKCPVNEVDETVSQSSLDQGKTVQSKANFSNRSPEETEMIKVGATGSGSCFSIVQNSSSIEEGGFRLISDDPSKRKKPRWDTSSFSNNINFQQPNSSRSSSIEEPDPEAIAQMKEMIYRAAAFRPVNFGLDGAEKPKRKNVRISTDPQTVAARHRRERISERIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALECLGNKVDAMNCPPTSIAFSFNPSFPMQTSLGHIHHSQG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01899 453 MobiDBLite consensus disorder prediction 198 250 - -
Phac10g01899 453 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 358 407 IPR011598 GO:0046983
Phac10g01899 453 SMART finulus 364 413 IPR011598 GO:0046983
Phac10g01899 453 MobiDBLite consensus disorder prediction 223 250 - -
Phac10g01899 453 Pfam Helix-loop-helix DNA-binding domain 368 407 IPR011598 GO:0046983
Phac10g01899 453 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 363 417 IPR036638 GO:0046983
Phac10g01899 453 MobiDBLite consensus disorder prediction 297 318 - -
Phac10g01899 453 MobiDBLite consensus disorder prediction 282 296 - -
Phac10g01899 453 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 168 438 IPR045843 GO:0003700|GO:0006355
Phac10g01899 453 MobiDBLite consensus disorder prediction 279 320 - -
Phac10g01899 453 Gene3D - 363 417 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01899 Phac-Chr10 41397542 41399687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01899 97 450 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.154 2.72e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g01899 HLH 3.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01899 - - vra:106773034 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01899 10 41397542 41399687 Phac10g01899 10 41397542 41399687 ECH