Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01869 ATGGAAAGAAAAGAGAGCCGCCGCACGCCCTCCGCCACAGCCTCCTCCGTGACGCGACGAGCCCCTCCGCGCCGCAACATCCTCCGATACTACGAGCCTCCTCCGCCCCGCGACAGCGTCGAAGGAATGACGGAGAGAAAAGAAGTGGTTGGGTTATCGTGGCAGCCACAGTTGTGTATTCCATTATCATCAAAAGTCAGTGATGGTTCTCATACCAAACCTCAAACGGAGCCATCAAACAACACTCTTTGGAAATCCAGTTCAGAGCTGATTGATGGCCTTTTCGTCCCTCCAAACAATCCCAGAAAATTAAACAAGTTACTGAAAAAGCAAGCTAAAGATACTGCGGGGAAAAGTTGGTTCGATATGCCGGCCCAAACCATCACCCCTGAGCTACAAAAAGATTTGAAATTGTTGAAGTTGAGGGCTGCTCTTGATCCAAAGCGTCATTACAAGAAAGTTGTGGATTCTCCATTGGACTACTTCTCAGGAAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGATGAGCTTCTTTCTGATCAAAACCTTGCAGCCTATAGGAAACGGAAGGTTCAAGAAATTGAAGAAAAAAATCGACCAGGTGGGAATGAAAGGTGGAAGATTAAAGATAACTTCTCCTGCATTTGCCTTGGAGATTTCAGTTTGGCTTCCTTTTCCAGCCAAAGGTGCATAATAGATATTGTCAACATGTTTTTCCTGTGTGTCTTTTATGTATCATTGCTCTCCAATCTGATCAAGAAAAGACCTGCAAATGCAAGTGGTAACTACAGAAAGGGATTGGTTCGGGTAGTTACTTCATTCTGTTGTACTATTTTAAGCATTGCATATTTTATGGATGGTTTGTGGAATGTCATAACCAAAACCTCAGGCTTCAATCAGCTGAACTTGTTGGTTTGCTTTGTGAGAGGACTAGTTTGGATATCTTTAGCAGCTTCATTGTTTGTTCAAAGGTTTCAATGGATAAAAAAATTATGCTCTATTTGGTGGGTGTTTTCATGCACATTGGTTTCAGTACTCAATGCTGAAATTCTGGTCAAAGAGCATAGATTTCAAATTTTTGATATGGCAATGTGGCCAGTGCACATCCTAACTGTTCTCTGTGCCTTCCAAAACCATGGCTACTTTGTCCCACAAGAAATCCCAGGTGCCAGTTTATGTGATCCTCTATTAGTTCATAAGGAAATGCATAAACAAACAGGACTGGGCCATGCCTCCTTTCTCAGCAGATTCACTTTCTCTTGGATGAATGCTTTGCTCAGTTTGGGTTACTCAAAGCCACTGGCACTTGCAGACATCCCTTCTCTTACTTCTGAAGATAAAGCTGAATTTGCATACCAAAAATTTGCACATGCATGGGTTTCCCTTTTGAGAGAAAGGGCCAGTAACAATTCCATAAACTTGGTCCTATGGTCCATAGCCCGAGTTTACATGAAAGAAAATATCTTCATAGACATTTGCGCATTTCTGAGGACATTTTGTGCTGTTGTTTCTCCTTTACTTATTTATGCTTTTGTAAACTATTCCAGTTGCAGTGAGGAAGACTTAAAACAAGGAATGGCCATAATGGGGTATCTTATATTAGCCAAGGTGGTTGAGTCTGTGTCTCAAAGACATTGGTCTTTTAATTCAAGGAGGTTAGGAATGAAAATGAGATCTGCTTTAATGGCTGCAGTGTATCAAAAGCAATTAAAGCTTTCAGCTTTGGGTAGGAAAAGACATTCAACTGGCGAGATTGTGAATTACATTGCAGTTGACGCATATCGAATGGGGGAATTTCCATGGTGGTTTCATACATTGTTGTTTTCTGCATTGCAACTTTTTCTGGCTCTTGGTGTCCTTTTTGGTGTTGTGGGTCTAGGTGCACTTCCTGGTTTGATGCCACTTCTCATTTGTGGATTTCTCAACGTACCCTTTGCAAAGATCCTTCAAAAACGTAGGTCGGAGTTTATGATTGCACAAGATGAGCGTCTGAGATCAACTTCAGAGATTCTTAGTTGTATGAAAATCATAAAGCTACAGTCCTGGGAGGATAACTTCAAGAAGCTAGTTGAATCCCTTCGCGCTAAAGAGTTAAAATGTTTGGCTGAAGTACAGTTCATGAGAGCTTGTGGAACATTTATATATTGGATGTCTCCCACCATCATTTCTTCAGTTATCTTAATGGGATGTGCGCTTTTCACGAGTGCCCCTTTGGATGCTGGAACTATTTTCACAGTTCTTGCAACACTGAGAAGCATGGGGGAACCTGTCATACTGATTCCAGAAGCACTTGCTGTAATGGAAGGAGGAAAAATTAGTCAATCGGGTAGCTATGAAGATCTGTTGACTGCTGGAACAGCCTTTGAACAGCTTTTGAGTGCTCATAGAGAGGCAATTGCAGGAATAGAAACAAATAGTGCAAACAAAAGAGAGGTTCAAAATGTGGTTACAGTTCAGCCTGAGGATTCTCATGTTTCTAATCTCACTAAACGTGGAAGTGAGGGGGAAATTTCTACCGAGATTCAACTTACACAAGAAGAAGAAAAGGAGAGTGGTGATATTGGGTGGCAGGCATTCTGTGACTATATTTTGTTCCCTAAGGGATCTTTTCTTCTATGTTTAAGCATATTAGCACAGTTGGCTTTTGTAGGTCTGCAAGCTGCATCAACTTCTTGGCTTGCTGTAGCCAATGAGATGTCAAAAGTAACTAGCAGCATCTTAGTTGGAGTTTATAGTGTGATTTCTTTCTTAAGCATTGTTTTTGTATTTCTGAGATCTTACTTTGCTGCACATCTTGGTTTAAAAGCTTCTAAAGCTTTCTTCTCTGCCTTCACTAATTCTATATTTAATGCTCCTATGTTGTTCTTTGATTCAACCCCAGTAGGGAGGATTTTGACCCGAGCTTCATCAGATATGAGTATTTTAGATTTCGATATCCCTTTTTCCACCATCTTTGTGACAGCTGAAGTAACAGAACTTCTTACAATGATTGTGATAATGGTTTCAATCACATGGCAAGTGCTCATTGTTGCAGTTCTTGCCATGGTGGCTTCAAAATATATTCAGGGCTATTATCAAGCTTCTGCAAGAGAAATTATACGAATCAGTGGAACTACAAAAGCTCCTCTTATGAATTTTACGGCTGAGACATATCTTGGTGTGGTTAGTATAAGAGCTTTCAACATGGCTGACAGGTTTTTCAAAAACTACCTTAACCTCGTCGACACAGATGCCGCTATGTTCTTTCATTCCTATGCTGGCATCGAATGGTTAATTCTAAGGATTGAAGTACTTCAGAATTTGACATTCTTCACTGCAGCTTTGCTGCTTGTTCTACTTCCAAAGGGATATGTGGCTCCTGGCCTTGTGGGACTTTCTCTGTCTTATGCTTTTTCACTGAGAGGAACCGTGGTTTATCTGACTCAAATGTTTTGCAACTTATCAAACTATGTGATCTCTGTTGAAAGAATCAAGCAATTCATCAACATACCAGCAGAGCCTAGTGCAATTGTAGAGGACAATAGACCCCCACCTTCTTGGCCTTCTAAAGGTCGAATAGATCTTCAATCTCTTGAGATTAGATATCGTCCAAATTCTCCATTAGTCCTGAAGGGCATCTCTTGCACGTTTAAAGAAGGGAGTAGAGTTGGAGTTGTAGGAAGAACAGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTACTAGAGGTGAAATTCTTATAGATGGGATTAATATATGCTCAATTGGGTTAAAAGATTTAAGAATAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGTAGCATTCGAAATAACTTGGACCCTCTAGGCCTGTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTCAAGGCAACAATCAGTAGTCTACCAAATCTCTTGGACACTTCTGGGGAAAACTGGAGTGTGGGGCAGCGCCAACTGATATGTCTTGGAAGGGTACTTCTTAAGAGGAGCAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGATTCTGCAACAGATGCTATTCTACAAGGAATCATCAGAGAAGAATTTTCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCCACTGTAATAGACAGTGATATGGTCATGGTCCTATCTTATGGGAAACTGGTGGAGTATGACAAGCCTTCAAAGCTTATGGATACTAACTCTTCATTCTCCAAGCTGGTAGCTGAATATTGGTCCCACTGCAACAGGAATTTCTCCCCAAAAGACTAG 4296 0.4104 MERKESRRTPSATASSVTRRAPPRRNILRYYEPPPPRDSVEGMTERKEVVGLSWQPQLCIPLSSKVSDGSHTKPQTEPSNNTLWKSSSELIDGLFVPPNNPRKLNKLLKKQAKDTAGKSWFDMPAQTITPELQKDLKLLKLRAALDPKRHYKKVVDSPLDYFSGRLTKKERKATLADELLSDQNLAAYRKRKVQEIEEKNRPGGNERWKIKDNFSCICLGDFSLASFSSQRCIIDIVNMFFLCVFYVSLLSNLIKKRPANASGNYRKGLVRVVTSFCCTILSIAYFMDGLWNVITKTSGFNQLNLLVCFVRGLVWISLAASLFVQRFQWIKKLCSIWWVFSCTLVSVLNAEILVKEHRFQIFDMAMWPVHILTVLCAFQNHGYFVPQEIPGASLCDPLLVHKEMHKQTGLGHASFLSRFTFSWMNALLSLGYSKPLALADIPSLTSEDKAEFAYQKFAHAWVSLLRERASNNSINLVLWSIARVYMKENIFIDICAFLRTFCAVVSPLLIYAFVNYSSCSEEDLKQGMAIMGYLILAKVVESVSQRHWSFNSRRLGMKMRSALMAAVYQKQLKLSALGRKRHSTGEIVNYIAVDAYRMGEFPWWFHTLLFSALQLFLALGVLFGVVGLGALPGLMPLLICGFLNVPFAKILQKRRSEFMIAQDERLRSTSEILSCMKIIKLQSWEDNFKKLVESLRAKELKCLAEVQFMRACGTFIYWMSPTIISSVILMGCALFTSAPLDAGTIFTVLATLRSMGEPVILIPEALAVMEGGKISQSGSYEDLLTAGTAFEQLLSAHREAIAGIETNSANKREVQNVVTVQPEDSHVSNLTKRGSEGEISTEIQLTQEEEKESGDIGWQAFCDYILFPKGSFLLCLSILAQLAFVGLQAASTSWLAVANEMSKVTSSILVGVYSVISFLSIVFVFLRSYFAAHLGLKASKAFFSAFTNSIFNAPMLFFDSTPVGRILTRASSDMSILDFDIPFSTIFVTAEVTELLTMIVIMVSITWQVLIVAVLAMVASKYIQGYYQASAREIIRISGTTKAPLMNFTAETYLGVVSIRAFNMADRFFKNYLNLVDTDAAMFFHSYAGIEWLILRIEVLQNLTFFTAALLLVLLPKGYVAPGLVGLSLSYAFSLRGTVVYLTQMFCNLSNYVISVERIKQFINIPAEPSAIVEDNRPPPSWPSKGRIDLQSLEIRYRPNSPLVLKGISCTFKEGSRVGVVGRTGSGKTTLISALFRLVEPTRGEILIDGINICSIGLKDLRIKLSIIPQEPTLFKGSIRNNLDPLGLYSDDEIWKALEKCQLKATISSLPNLLDTSGENWSVGQRQLICLGRVLLKRSRILVLDEATASIDSATDAILQGIIREEFSECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDKPSKLMDTNSSFSKLVAEYWSHCNRNFSPKD* 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01869 1431 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 870 1151 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01869 1431 MobiDBLite consensus disorder prediction 1 42 - -
Phac10g01869 1431 Pfam ABC transporter 1205 1349 IPR003439 GO:0005524
Phac10g01869 1431 MobiDBLite consensus disorder prediction 63 83 - -
Phac10g01869 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1177 1417 IPR027417 -
Phac10g01869 1431 FunFam ABC transporter C family member 3 1171 1418 - -
Phac10g01869 1431 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 494 771 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01869 1431 Coils Coil 681 701 - -
Phac10g01869 1431 SUPERFAMILY ABC transporter transmembrane region 866 1168 IPR036640 GO:0005524|GO:0016020
Phac10g01869 1431 CDD ABC_6TM_ABCC_D1 494 775 IPR044746 GO:0140359
Phac10g01869 1431 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1190 1418 IPR003439 GO:0005524
Phac10g01869 1431 Gene3D ABC transporter type 1, transmembrane domain 477 777 IPR036640 GO:0005524|GO:0016020
Phac10g01869 1431 Gene3D ABC transporter type 1, transmembrane domain 842 1169 IPR036640 GO:0005524|GO:0016020
Phac10g01869 1431 Pfam ABC transporter transmembrane region 876 1135 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01869 1431 Pfam ABC transporter transmembrane region 494 751 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01869 1431 FunFam ABC transporter C family member 10 473 778 - -
Phac10g01869 1431 Gene3D - 1171 1418 IPR027417 -
Phac10g01869 1431 FunFam ABC transporter C family member 5 838 1169 - -
Phac10g01869 1431 Pfam Fcf2 pre-rRNA processing 113 192 IPR014810 -
Phac10g01869 1431 CDD ABCC_MRP_domain2 1186 1402 - -
Phac10g01869 1431 CDD ABC_6TM_ABCC_D2 870 1163 IPR044726 GO:0140359
Phac10g01869 1431 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 767 1416 - -
Phac10g01869 1431 SMART AAA_5 1214 1403 IPR003593 GO:0016887
Phac10g01869 1431 SUPERFAMILY ABC transporter transmembrane region 478 772 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01869 Phac-Chr10 41153725 41164422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01869 1186 1416 Calmodulin-binding Proteins AT2G36910 32.365 2.57e-28 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01869 - - gmx:100813711 1129.01