Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01864 ATGATGACGATGATCTTTAATGGATACACAGATGATTTCTCATGGATTTGTCTGAAGGATTTTGAGTTCACTTCTTTCTGTTCCCAAAGAACCACAATAGACACAATAAATCTACTTTTCGTCTGTGTTTTCTACGCTTCTACGATTGTCAGTTTAATCAGAAGAAATGTTATAAATGGAAGTCATAGCAAAAGCAAGCTTTTCCTTACTGTCTCTATCTGTTGTGCTATCACTAGCATCGCGTTTTACACTATTGGCTTGTGGAATCTCATTGCCAAAACTGGTAACTCCATGGCTAACTTAGCATGCATCGTAAGAGGATTTGTTTGGACTTCTTTGGCAGTTTCTTTGCTTGTTCAGAGACACAAATGGATCAAAATTCTAAACTCTGTCTGGTGGGCATGTTCCTGTGCACTAGTTTCAGCTCTCGACATTGAAATTCTGTTCAGAAAGCATGCAATCGAAATTTTCGACGTCCTACTATGGATCTTGCACACACTTGTTCTCTTCTGTGCCTTCCAAAATCTTGGTTACTTTGTCACTCAAAGTGTGTCAAAAAGTTTGTCTGAGCCATTGTTAGCTCAGGAATTTGACACAGAAGAAACAGGACTAGGCCGTGCTTCCTTTCTGAGCAAGTTGACCTTCTCTTGGGTTAACTCCTTACTCAGTCTGGGTTACTCAAAGCCACTATCTCTTGAAGACATCCCTTCCCTTCTCTCTGAAGATAAAGCAGAATTGTCCCACCAAAACTTCATGCATGCATGGGAATCCCTTGTGTGTGAGAGAAGCAAGAACAATACCAAGAACTTGGTGCTTTGGTCCATTGTTAGAACTCACTTCAAAGAGAACGTATTAATAGCTTTTTATGCATTACTCAGAACCATTGCTGTGGCTGTTTCTCCTTTAATAATCTATGCTTTTGTCAACTTTTCAAATGGTAGGGATAGTGAGGATACAGATCTCAAAGAAGGTCTTACCATAGTGGGTTTTCTTATTCTCTCCAGAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTCATTCCAGGAGATCAGGATTGAAGATGAGATCAGCTCTGATGGTGGCAGTGTATAAAAAAAACCTAAAGCTTTCAAGCTCAGCAAGGACAAGACACTCCACAGGTGAAATTGTGAATTACATTGCAGTTGATGCATATCGCATGGGAGAATTTCCACGGTGGTTTCATATAACATGGGCATGTACATTGCAAATTCTCCTATCTATAGGTATCCTTTATGGAGTTATGGGAGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCCAAGATCCTACAAAAATGCATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGAGCAACTTCAGAAATTCTAAACAGCATGAAAATCATTAAGTTACAGTCCTGGGAAGACAAATTCAAGAGTTTGGTTGAGAACCTACGTGGGAAAGAGTTCATTTGGCTATCTAAGGCACAGATCCTGAAAGCTTATGGCTCATTTTTGTATTGGATGTCTCCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTGCTTTCAATAGTGCTCCATTGAATGCTGGGACCATATTTACAGTATCTTTTGATCGTCTCAATACCTTTTTGCTTGATGAGGAACTAGATAGCAGTGATGATAGTAGAAGACATATAAACCGAAGTTCAGTTAATGCGGTTGAAATCCAAGGTGGCAACTTCATTTGGGACCATGAATCAGTGTCCCCAACTTTGAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAGTTGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTTTTGTATGCAGTACTGGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGTGTCCAGCAACATAGCATATGTTTCTCAAACCTCTTGGATACAAAGTGGGACGGTTCAAGATAATATACTCTTTGGCAAGCCGATGGAAAAAACAAGATATGAGAGTGCCATTAAAGTTTGTGCTTTGGATAAAGATATCAGTGATTTTAGCCACGGTGATCTTACAGAAATAGGGCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCTGTCTACAATGATGCTGACATTTATCTCCTCGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTTTTCAAAGACTGCGTAATGACGGCTCTAAGAGAGAAAACAGTCATTCTAGTGACACATCAAGTGGAGTTTCTCTCAGAAGTTGATGCAATCCTGGTGATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGGGAATCTCTTAACAGCTGGGACTGCCTTTGAACAACTTGTGAGCGCGCATAAGGAAGCAATTACAGAGTTGGATCAGACTAATGAGAACAAAACTCAGAGAGAAGATTCTGAAGGTGTTTATCTACCTAAAAATCAAAGTGAGGGGGAGATTTCTACCGAGGGTCAACATGGGATACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTTGAAGACATTATGGGATTATATTTCATTTTCAAGGGGTTCATTGATGCTGTCATGGATACTGTTGGCACAATTTGCTTTTACTGCTTTGCAGACTGCATCAATGGTTTGGCTTGCCTTAGCCATTGAAATTCCAAAAATAACTAGTGCCACCTTGATTGGGGTGTACTCTTTAATCTCATTTGCTAGTGCTGCGTTTATATATGTAAGGTCTCTCTTGACCTCTTACCTCGGATTAAAAGCTTCTAAAGCTTTCTTCACAAGTTTCAATACTGCTATCTTCAATGCTCCTATGCTGTTCTTTGACTCAACCCCTGTAGGAAGGATTTTAACGAGAGCTTCATCAGATTTAAGTATTTTGGACTTTGATATACCTTATTCGATCACCTTTGTAGCATCTGTAGCAATTGAAATTTTGGTGACGATTTGTGTAATGGTTTTTGCAACATGGCCAGTTCTCATTGTTGCCATTCCTGCCATAGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCGTCAAGGGAGTTGACGAGGATCAATGGAACCACAAAAGCTCCTGTAATGAATTTTGCAGCTGAGACATCACTTGGTGTGGTTACTGTGAGAGCATTTAATATGGTGGAAAGATTTTTTAAGACTTACTTAAAGCTTGTGGACACAGACGCAACACTGTTTTTTCATTCTAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTTCAGCTTTGCTACTTATTCTATTTCCTCAGGGATACGTGTCCACGGGCCTTGTGGGACTATCTCTCTCTTATGCTTTAAGCTTCACAGCAGCCTACACATTTTGGACTCGATGGTATTGCAATTTATTAAACTATGTTATATCTGTTGAAAGAATCAAGCAATTCATTCACCTACCATCAGACCCTCCTGCCATTATGAAGGACCACCGACCTCCATCTTCATATCGTCCTAATGCTCCATTAGTACTTAAGGGTATCACTTGTATGTTTAGAGAAGGGAGTAGAGTGGGAGTTGTGGGAAGAACCGGAAGTGGAAAAAGTACACTCATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCACGGGGTGATATTCTTATAGATGGGATTAGCATATGCTCAATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTTTAGGCCTGTACTCAGATGATGAGATATGGAAGGCTTTGGAGAAATGCCAGCTTAAGGAAACTATCAGCCATCTACCAAATCTCTTAGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGCCAAAGGCAACTGTTTTGTCTAGGAAGAGTACTGCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACTGATGCAATTCTACAAAGAATTATCAGACAAGAGTTTGTAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTCTCCTATGGAAAAGTGGTGGAATATGATGAACCTTCAAGATTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGGCCAGCTGCAGCAAGAATTCCTCCTAA 4254 0.4064 MMTMIFNGYTDDFSWICLKDFEFTSFCSQRTTIDTINLLFVCVFYASTIVSLIRRNVINGSHSKSKLFLTVSICCAITSIAFYTIGLWNLIAKTGNSMANLACIVRGFVWTSLAVSLLVQRHKWIKILNSVWWACSCALVSALDIEILFRKHAIEIFDVLLWILHTLVLFCAFQNLGYFVTQSVSKSLSEPLLAQEFDTEETGLGRASFLSKLTFSWVNSLLSLGYSKPLSLEDIPSLLSEDKAELSHQNFMHAWESLVCERSKNNTKNLVLWSIVRTHFKENVLIAFYALLRTIAVAVSPLIIYAFVNFSNGRDSEDTDLKEGLTIVGFLILSRVVDSVSQRHWFFHSRRSGLKMRSALMVAVYKKNLKLSSSARTRHSTGEIVNYIAVDAYRMGEFPRWFHITWACTLQILLSIGILYGVMGVGALPGLVPLLICGLLNVPFAKILQKCMAQFMISQDERLRATSEILNSMKIIKLQSWEDKFKSLVENLRGKEFIWLSKAQILKAYGSFLYWMSPTIVSAVVFLGCAAFNSAPLNAGTIFTVSFDRLNTFLLDEELDSSDDSRRHINRSSVNAVEIQGGNFIWDHESVSPTLRDVNLEIKWGQKVAVCGPVGAGKSSLLYAVLGEIPKISGTVNVSSNIAYVSQTSWIQSGTVQDNILFGKPMEKTRYESAIKVCALDKDISDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFKDCVMTALREKTVILVTHQVEFLSEVDAILVMEGGKVTQSGNYGNLLTAGTAFEQLVSAHKEAITELDQTNENKTQREDSEGVYLPKNQSEGEISTEGQHGIQLTQEEEKEIGDVGLKTLWDYISFSRGSLMLSWILLAQFAFTALQTASMVWLALAIEIPKITSATLIGVYSLISFASAAFIYVRSLLTSYLGLKASKAFFTSFNTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVAIEILVTICVMVFATWPVLIVAIPAIVASKYVQGYYQASSRELTRINGTTKAPVMNFAAETSLGVVTVRAFNMVERFFKTYLKLVDTDATLFFHSNVAMEWLVLRIEALQNLTVITSALLLILFPQGYVSTGLVGLSLSYALSFTAAYTFWTRWYCNLLNYVISVERIKQFIHLPSDPPAIMKDHRPPSSYRPNAPLVLKGITCMFREGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGISICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISHLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFVECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSRLMDTNSSFSKLVAEYWASCSKNSS* 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01864 1417 Gene3D ABC transporter type 1, transmembrane domain 838 1168 IPR036640 GO:0005524|GO:0016020
Phac10g01864 1417 SUPERFAMILY ABC transporter transmembrane region 272 545 IPR036640 GO:0005524|GO:0016020
Phac10g01864 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 799 IPR027417 -
Phac10g01864 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 547 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01864 1417 CDD ABC_6TM_ABCC_D1 285 545 IPR044746 GO:0140359
Phac10g01864 1417 Pfam ABC transporter transmembrane region 904 1135 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01864 1417 Pfam ABC transporter transmembrane region 285 547 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01864 1417 SMART AAA_5 1199 1392 IPR003593 GO:0016887
Phac10g01864 1417 SMART AAA_5 604 777 IPR003593 GO:0016887
Phac10g01864 1417 FunFam ABC transporter C family member 10 267 558 - -
Phac10g01864 1417 SUPERFAMILY ABC transporter transmembrane region 861 1170 IPR036640 GO:0005524|GO:0016020
Phac10g01864 1417 Pfam ABC transporter 595 729 IPR003439 GO:0005524
Phac10g01864 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1180 1406 IPR027417 -
Phac10g01864 1417 CDD ABC_6TM_ABCC_D2 870 1163 IPR044726 GO:0140359
Phac10g01864 1417 FunFam Multidrug resistance-associated protein member 4 1174 1408 - -
Phac10g01864 1417 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 206 1409 - -
Phac10g01864 1417 ProSitePatterns ABC transporters family signature. 702 716 IPR017871 GO:0005524|GO:0016887
Phac10g01864 1417 MobiDBLite consensus disorder prediction 808 844 - -
Phac10g01864 1417 Pfam ABC transporter 1190 1338 IPR003439 GO:0005524
Phac10g01864 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 876 1138 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g01864 1417 CDD ABCC_MRP_domain2 1181 1391 - -
Phac10g01864 1417 Gene3D - 1179 1407 IPR027417 -
Phac10g01864 1417 Gene3D - 550 825 IPR027417 -
Phac10g01864 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1173 1407 IPR003439 GO:0005524
Phac10g01864 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 800 IPR003439 GO:0005524
Phac10g01864 1417 FunFam Multidrug resistance protein associated1 555 820 - -
Phac10g01864 1417 FunFam ABC transporter C family member 5 837 1169 - -
Phac10g01864 1417 CDD ABCC_MRP_domain1 577 777 - -
Phac10g01864 1417 Gene3D ABC transporter type 1, transmembrane domain 271 549 IPR036640 GO:0005524|GO:0016020
Phac10g01864 1417 MobiDBLite consensus disorder prediction 808 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01864 Phac-Chr10 41135216 41141454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01864 564 821 Calmodulin-binding Proteins AT2G36910 26.148 4.22e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01864 - - gmx:100784827 2351.63